G328794


Basic Information

Item Value
gene id G328794
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 1678145 ~ 1678925 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU373714
ATTTCCTCCTGCAGTGATGTCCGAATGAATGTTTACAAATTATATTAGTTTACACTGAAATCTAAAAATCTCTCTCGCTCTCTCTCTCTGTGGAAGTGACTTCTTGCAACAACGAGTAACTGGCTCCTCACTTAGTTCAAAGAGGTGTTTTTCTCACTAGAGATAAATGTGATATTGTGGAATATTACTGGAGATCACGCAGCAATTGACTTCAAAACAAGACCCGTATTAAAGCTGCTTATTTCTTAAAGTTTACTTTTTCAAGGTACTACTATAATATAAATGCATACATATATTTCATACAGTTTCTATTTGGGTGCATAAAGGGTTAGTTCACCCAAACATATAAATTCAGTCATTATTTACTCGCCTTCATGCTGTCAATCCCTGTGTTTTTCTGAACACAAAAGGTGATTTGTCAAGTTTGTCCTGCTGGTTTCTGTTCATACAGTATCAGTAAATGGAGCCTGACTTCCAGAAGCTTCATGACATTATTTGATGATGCTTTTGAAGCTCCATTGTATGAACAGAAACCAGCAGAACAAACTTGACCAAAATCACATCCTCAATGTCCTTTGGTCTTTGTTTAGATGCTGTCGCTGGCTCTGGGCTCACTGAGGATGAAGAGACCACATCAACATCAGGCCAGATGAGGCAGTAAGGGCAGGAGGAGTGATGGAGGGTCTCATCCATGGCTCTACACCATTCCCAGGATCTGCTGTGACTCTCCACCCTCAGTGCTCACACCAGTCTGAGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU373714 True 759 lncRNA 0.41 2 1678145 1678925

Neighbor

gene id symbol gene type direction distance location
CI01000112_01534218_01550547 MGAT5B coding upstream 127269 1534218 ~ 1550876 (+)
CI01000112_01493953_01497856 NA coding upstream 179461 1493953 ~ 1498684 (+)
CI01000112_01473681_01484126 NA coding upstream 193511 1473357 ~ 1484634 (+)
CI01000112_01304699_01321467 NA coding upstream 356437 1304303 ~ 1321708 (+)
CI01000112_00975908_00994568 RHOT1B, RHOT1, RHOT1A coding upstream 682080 975908 ~ 996065 (+)
CI01000112_01711753_01717045 NA coding downstream 32307 1711232 ~ 1717114 (+)
CI01000112_01753138_01753764 NA coding downstream 74031 1752956 ~ 1754407 (+)
CI01000112_01831462_01857713 NA coding downstream 152537 1831462 ~ 1858703 (+)
CI01000112_01865388_01878028 LUC7L3 coding downstream 186176 1865101 ~ 1878188 (+)
CI01000112_01883455_01914770 NA coding downstream 204319 1883244 ~ 1914775 (+)
G328588 NA non-coding upstream 122813 1554611 ~ 1555332 (+)
G328612 NA non-coding upstream 211225 1466697 ~ 1466920 (+)
G328611 NA non-coding upstream 211836 1466032 ~ 1466309 (+)
G328609 NA non-coding upstream 216536 1461402 ~ 1461609 (+)
G328608 NA non-coding upstream 216934 1460925 ~ 1461211 (+)
G328876 NA non-coding downstream 73475 1752400 ~ 1752626 (+)
G328878 NA non-coding downstream 76027 1754952 ~ 1755283 (+)
G328879 NA non-coding downstream 77263 1756188 ~ 1756537 (+)
G328830 NA non-coding downstream 97184 1776109 ~ 1802333 (+)
G328826 NA non-coding downstream 117171 1796096 ~ 1809959 (+)
G328456 NA other upstream 445027 1232022 ~ 1233118 (+)
G329125 NA other downstream 938779 2617704 ~ 2618151 (+)
G329194 NA other downstream 1241329 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 3405795 5076817 ~ 5101845 (+)

Expression


Co-expression Network