Item | Value |
---|---|
gene id | G329672 |
gene name | NA |
gene type | unknown |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000112 |
NCBI id | null |
chromosome length | 5247617 |
location | 2016704 ~ 2019453 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU374741 | True | 600 | TUCP | 0.49 | 3 | 2016704 | 2019453 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000112_02000588_02006313 | NA | coding | downstream | 9571 | 2000527 ~ 2007133 (-) |
CI01000112_01999128_02000283 | NA | coding | downstream | 16421 | 1999119 ~ 2000283 (-) |
CI01000112_01967374_01971965 | NA | coding | downstream | 44739 | 1967058 ~ 1971965 (-) |
CI01000112_01953215_01962043 | NA | coding | downstream | 53953 | 1953158 ~ 1962751 (-) |
CI01000112_01772132_01776695 | PRPSAP1 | coding | downstream | 239851 | 1771747 ~ 1776853 (-) |
CI01000112_02087239_02090806 | NA | coding | upstream | 67256 | 2086709 ~ 2090806 (-) |
CI01000112_02096880_02108616 | MFSD13B | coding | upstream | 77113 | 2096566 ~ 2108616 (-) |
CI01000112_02143799_02166631 | NA | coding | upstream | 124292 | 2143745 ~ 2166631 (-) |
CI01000112_02185619_02204929 | C14H16ORF52 | coding | upstream | 165640 | 2185093 ~ 2212627 (-) |
CI01000112_02213671_02227376 | NA | coding | upstream | 193847 | 2213300 ~ 2227643 (-) |
G329666 | NA | non-coding | downstream | 8475 | 2008009 ~ 2008229 (-) |
G329580 | NA | non-coding | downstream | 32568 | 1981368 ~ 1984136 (-) |
G329579 | NA | non-coding | downstream | 35894 | 1977701 ~ 1980810 (-) |
G329595 | NA | non-coding | downstream | 41785 | 1973760 ~ 1974919 (-) |
G329687 | NA | non-coding | upstream | 13354 | 2032807 ~ 2033128 (-) |
G329686 | NA | non-coding | upstream | 15493 | 2034946 ~ 2035320 (-) |
G329702 | NA | non-coding | upstream | 34127 | 2053580 ~ 2054018 (-) |
G329710 | NA | non-coding | upstream | 51763 | 2071216 ~ 2071529 (-) |
G329718 | NA | non-coding | upstream | 75727 | 2095180 ~ 2095409 (-) |
G329569 | NA | other | downstream | 18845 | 1991666 ~ 1997859 (-) |
G329559 | NA | other | downstream | 206965 | 1791084 ~ 1809739 (-) |
G329587 | NA | other | downstream | 383382 | 1629776 ~ 1633322 (-) |
G328642 | NA | other | downstream | 729746 | 1286655 ~ 1286958 (-) |
G328641 | NA | other | downstream | 730180 | 1286092 ~ 1286524 (-) |
CI01000112_03068505_03072256 | NA | other | upstream | 1047867 | 3067320 ~ 3072879 (-) |
CI01000112_03506254_03517454 | NA | other | upstream | 1485002 | 3504455 ~ 3518742 (-) |
G330301 | NA | other | upstream | 1740346 | 3758244 ~ 3773774 (-) |