XLOC_011232


Basic Information

Item Value
gene id XLOC_011232
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 7446509 ~ 7446781 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024454
taaataatctagctcctgtttaaataaccaaccttctgtctcactaaaatccaacccgctctttaagatctcaaaactcagtgcttctggtagtacctagaataggaAAGTCAAGTCGAGCCTTTTCATTTATGGCTACGAAACTCTGGAATTGCCTTCCTGATAAAATCCgatgctcagacacactctcccagttcaaaactaaattaaacacttatctttttagtaaagcatacactcagtgcatcacttgcAATATGCATGCATAAATGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024454 True 273 lncRNA 0.38 1 7446509 7446781

Neighbor

gene id symbol gene type direction distance location
XLOC_011231 CABZ01057751.1 coding upstream 126344 7320042 ~ 7320165 (+)
XLOC_011230 NA coding upstream 217497 7226730 ~ 7229012 (+)
XLOC_011229 zgc:172341 coding upstream 474563 6956696 ~ 6971946 (+)
XLOC_011228 si:ch73-242m19.1 coding upstream 514448 6828550 ~ 6932061 (+)
XLOC_011227 ccdc162 coding upstream 620353 6822337 ~ 6826156 (+)
XLOC_011233 klhl10b.1 coding downstream 63439 7510220 ~ 7521586 (+)
XLOC_011234 klhl10b.2 coding downstream 75996 7522777 ~ 7531632 (+)
XLOC_011235 shprh coding downstream 87399 7534180 ~ 7589306 (+)
XLOC_011236 si:dkeyp-110a12.4 coding downstream 148575 7595356 ~ 7617558 (+)
XLOC_011237 fbxo30a coding downstream 173439 7620220 ~ 7628458 (+)
XLOC_011220 NA non-coding upstream 917966 6528023 ~ 6528543 (+)
XLOC_011217 NA non-coding upstream 1053942 6386640 ~ 6392567 (+)
XLOC_011213 NA non-coding upstream 1235237 6208159 ~ 6211272 (+)
XLOC_011238 BX511121.2 non-coding downstream 214427 7661208 ~ 7661324 (+)
XLOC_011239 BX088649.1 non-coding downstream 294835 7741616 ~ 7747160 (+)
XLOC_011242 BX927406.1 non-coding downstream 643576 8090357 ~ 8090474 (+)
XLOC_011246 NA non-coding downstream 778874 8225655 ~ 8229883 (+)
XLOC_011249 BX248131.2 non-coding downstream 853609 8300390 ~ 8300504 (+)

Expression


Co-expression Network