G328984


Basic Information

Item Value
gene id G328984
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2173268 ~ 2173528 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU373938
TTGGTCTCATCAGACCACAGGACATGGTTCCAGTAATCCATGTCCTTAGTCTGCTTGTCTTCAGCCAACTGTTTGCGGGCTTTCTTGTGCATCATCTTTAGAAGAGGCTTCCTTCTGGGACGACAGCCATGCAGACCAATTTGACGCCCTTCAACCTCTGCAGCAATGCTGGCAGCACTCATATGTCTATATCCCAAACACAACCTCTGGATATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU373938 True 216 lncRNA 0.48 2 2173268 2173528

Neighbor

gene id symbol gene type direction distance location
CI01000112_02109843_02114079 CDR2A coding upstream 58705 2109843 ~ 2114563 (+)
CI01000112_02060950_02068272 UNM_SA1261 coding upstream 104664 2060721 ~ 2068604 (+)
CI01000112_02017278_02032299 U2AF2 coding upstream 140855 2017278 ~ 2032413 (+)
CI01000112_01883455_01914770 NA coding upstream 258493 1883244 ~ 1914775 (+)
CI01000112_01865388_01878028 LUC7L3 coding upstream 295080 1865101 ~ 1878188 (+)
CI01000112_02207728_02210655 NA coding downstream 34162 2207690 ~ 2210957 (+)
CI01000112_02240184_02240792 C16ORF52 coding downstream 64141 2237669 ~ 2241243 (+)
CI01000112_02261335_02262540 NH2L1, SNU13.S, BRAFLDRAFT_68109, SNU13.L, SNU13B, SNU13, SNU13A coding downstream 87807 2261335 ~ 2262781 (+)
CI01000112_02275641_02277644 NA coding downstream 102113 2275641 ~ 2278611 (+)
CI01000112_02295987_02301298 NA coding downstream 122371 2295899 ~ 2302593 (+)
G328973 NA non-coding upstream 22557 2150370 ~ 2150711 (+)
G328965 NA non-coding upstream 29241 2143529 ~ 2144027 (+)
G328918 NA non-coding upstream 120226 2052598 ~ 2053042 (+)
G328828 NA non-coding upstream 137963 2033398 ~ 2035305 (+)
G328831 NA non-coding upstream 140121 2032793 ~ 2033147 (+)
G328986 NA non-coding downstream 7135 2180663 ~ 2180917 (+)
G328987 NA non-coding downstream 7500 2181028 ~ 2181371 (+)
G328988 NA non-coding downstream 7880 2181408 ~ 2181633 (+)
G328989 NA non-coding downstream 9376 2182904 ~ 2183442 (+)
G328926 NA non-coding downstream 68344 2241872 ~ 2243184 (+)
G328456 NA other upstream 940150 1232022 ~ 1233118 (+)
G329125 NA other downstream 444176 2617704 ~ 2618151 (+)
G329194 NA other downstream 746726 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 2911192 5076817 ~ 5101845 (+)

Expression


Co-expression Network