G328986


Basic Information

Item Value
gene id G328986
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2180663 ~ 2180917 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU373940
CGTCATCTGGATAGGAGTATATGTTGCTCTAAAACCTTTATATACCTTTCAGCATTCATAGTGCCTTCCAAAACATGCAACCTGCCCATACCGTATGCACTTATGCACCCCCATACCATCAGAAATGCTGACTTTTGAACTGAACGCTGATGGCTTCCTTTTAGCATGATAGAGCTTTAGTTGGCATCTGCAGATGGTACGGTGGATTATGTTTACTGACAGTGGTTTCTGTAAGTATTCCTGGGCCCATTTAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU373940 True 255 lncRNA 0.43 1 2180663 2180917

Neighbor

gene id symbol gene type direction distance location
CI01000112_02109843_02114079 CDR2A coding upstream 66100 2109843 ~ 2114563 (+)
CI01000112_02060950_02068272 UNM_SA1261 coding upstream 112059 2060721 ~ 2068604 (+)
CI01000112_02017278_02032299 U2AF2 coding upstream 148250 2017278 ~ 2032413 (+)
CI01000112_01883455_01914770 NA coding upstream 265888 1883244 ~ 1914775 (+)
CI01000112_01865388_01878028 LUC7L3 coding upstream 302475 1865101 ~ 1878188 (+)
CI01000112_02207728_02210655 NA coding downstream 26773 2207690 ~ 2210957 (+)
CI01000112_02240184_02240792 C16ORF52 coding downstream 56752 2237669 ~ 2241243 (+)
CI01000112_02261335_02262540 NH2L1, SNU13.S, BRAFLDRAFT_68109, SNU13.L, SNU13B, SNU13, SNU13A coding downstream 80418 2261335 ~ 2262781 (+)
CI01000112_02275641_02277644 NA coding downstream 94724 2275641 ~ 2278611 (+)
CI01000112_02295987_02301298 NA coding downstream 114982 2295899 ~ 2302593 (+)
G328984 NA non-coding upstream 7135 2173268 ~ 2173528 (+)
G328973 NA non-coding upstream 29952 2150370 ~ 2150711 (+)
G328965 NA non-coding upstream 36636 2143529 ~ 2144027 (+)
G328918 NA non-coding upstream 127621 2052598 ~ 2053042 (+)
G328828 NA non-coding upstream 145358 2033398 ~ 2035305 (+)
G328987 NA non-coding downstream 111 2181028 ~ 2181371 (+)
G328988 NA non-coding downstream 491 2181408 ~ 2181633 (+)
G328989 NA non-coding downstream 1987 2182904 ~ 2183442 (+)
G328926 NA non-coding downstream 60955 2241872 ~ 2243184 (+)
G328925 NA non-coding downstream 62451 2243368 ~ 2248408 (+)
G328456 NA other upstream 947545 1232022 ~ 1233118 (+)
G329125 NA other downstream 436787 2617704 ~ 2618151 (+)
G329194 NA other downstream 739337 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 2903803 5076817 ~ 5101845 (+)

Expression


Co-expression Network