Gene
RNA
| Item | Value |
|---|---|
| gene id | G329098 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000112 |
| NCBI id | null |
| chromosome length | 5247617 |
| location | 2541667 ~ 2542297 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU374065 | True | 360 | lncRNA | 0.34 | 2 | 2541667 | 2542297 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000112_02532994_02538052 | NA | coding | upstream | 3542 | 2530024 ~ 2538125 (+) |
| CI01000112_02503439_02516455 | LGALS3BPA, LGALS3BPB | coding | upstream | 25031 | 2502872 ~ 2516636 (+) |
| CI01000112_02483013_02484955 | LGALS3BPA | coding | upstream | 56534 | 2483013 ~ 2485133 (+) |
| CI01000112_02466191_02472040 | CANT1A, CANT1 | coding | upstream | 69100 | 2466191 ~ 2472567 (+) |
| CI01000112_02454665_02459341 | NA | coding | upstream | 82326 | 2454630 ~ 2459341 (+) |
| CI01000112_02565726_02573879 | TIMP2B | coding | downstream | 23211 | 2565508 ~ 2574106 (+) |
| CI01000112_02585528_02607525 | USP36 | coding | downstream | 42632 | 2584929 ~ 2607668 (+) |
| CI01000112_02659891_02661832 | NA | coding | downstream | 117594 | 2659891 ~ 2662015 (+) |
| CI01000112_02740099_02758394 | CYTH1, CYTH1A, CYH1 | coding | downstream | 197802 | 2740099 ~ 2758394 (+) |
| CI01000112_02774549_02777028 | SOCS3, SOCS3A | coding | downstream | 231159 | 2773456 ~ 2778631 (+) |
| G329067 | NA | non-coding | upstream | 116469 | 2423842 ~ 2425198 (+) |
| G329080 | NA | non-coding | upstream | 128954 | 2412411 ~ 2412713 (+) |
| G329079 | NA | non-coding | upstream | 130947 | 2410495 ~ 2410720 (+) |
| G329025 | NA | non-coding | upstream | 258757 | 2282689 ~ 2282910 (+) |
| G329015 | NA | non-coding | upstream | 259042 | 2250076 ~ 2282625 (+) |
| G329097 | NA | non-coding | downstream | 108077 | 2650374 ~ 2653361 (+) |
| G329145 | NA | non-coding | downstream | 230204 | 2772501 ~ 2772741 (+) |
| G329151 | NA | non-coding | downstream | 242743 | 2785040 ~ 2785269 (+) |
| G329153 | NA | non-coding | downstream | 246130 | 2788427 ~ 2788857 (+) |
| G329101 | NA | non-coding | downstream | 320788 | 2863085 ~ 2868729 (+) |
| G328456 | NA | other | upstream | 1308549 | 1232022 ~ 1233118 (+) |
| G329125 | NA | other | downstream | 75407 | 2617704 ~ 2618151 (+) |
| G329194 | NA | other | downstream | 377957 | 2920254 ~ 2931889 (+) |
| CI01000112_05076817_05101845 | NA | other | downstream | 2542423 | 5076817 ~ 5101845 (+) |
