G329125


Basic Information

Item Value
gene id G329125
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2617704 ~ 2618151 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU374096
TTTATAGTCCAGGTAGTGTGCTAAGCTGTATGTGGCAGCTGGTGATTGGTGTGGAGTGTGCATGTGATTGGCAAGGAGGATTATGGGAAATGGAGTCCAGGAACTGACAGGAACAGACAGTGATCGTGACATAACGCCCCCCTTCCGGAAGGCGCGTCCTCGCGGCGTAAATGGCACAGATAGGGAGGGGGGGTGGGTACATTGGAGACCTGTTGGCAGACGGGAACGGGGTCTCCAATGCAGGTCCAGGAACTCGGGCAGCCATGGCGGGTCAGGTGCCACGGGCGGCCACGGCGGGTCAGGTGCCACGGGCGGCCACGGCGGGTCAGGAGTGTCGGGAGGCCACGGCGGGTCAGGTGGCTTGGGCGCCCACGGCAGGTCAGGTGGCTTGGGCAACCACGGCAGGTCAGGTGGCTTGGGC
>TU374097
TTTATAGTCCAGGTAGTGTGCTAAGCTGTATGTGGCAGCTGGTGATTGGTGTGGAGTGTGCATGTGATTGGCAAGGAGGATTATGGGAAATGGAGTCCAGGAACTGACAGGAACAGACAGTGATCGTGACATAACGCCCCCCTTCCGGAAGGCGCGTCCTCGCGGCGTAAATGGCACAGATAGGGAGGGGGGGTGGGTACATTGGAGACCTGTTGGCAGACGGGAACGGGGTCTCCAATGCAGGTCCAGGAACTCGGGCAGCCATGGCGGGTCAGGTGCCACGGGCGGCCACGGCGGGTCAGGAGTGTCGGGAGGCCACGGCGGGTCAGGTGGCTTGGGCAACCACGGCAGGTCAGGTGGCTTGGGCAACCACGGCAGGTCAGGTGGCTTGGGC
>TU374098
TTTATAGTCCAGGTAGTGTGCTAAGCTGTATGTGGCAGCTGGTGATTGGTGTGGAGTGTGCATGTGATTGGCAAGGAGGATTATGGGAAATGGAGTCCAGGAACTGACAGGAACAGACAGTGATCGTGACATAACGCCCCCCTTCCGGAAGGCGCGTCCTCGCGGCGTAAATGGCACAGATAGGGAGGGGGGGTGGGTACATTGGAGACCTGTTGGCAGACGGGAACGGGGTCTCCAATGCAGGTCCAGGAACTCGGGCAGCCATGGCGGGTCAGGTGCCACGGGCGGCCACGGCGGGTCAGGTGCCACGGGCGGCCACGGCGGGTCAGGAGTGTCGGGAGGCCACGGCGGGTCAGGTGGCTTGGGCAACCACGGCAGGTCAGGTGGCTTGGGCAACCACGGCAGGTCAGGTGGCTTGGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU374096 False 421 TUCP 0.63 2 2617704 2618151
TU374097 False 394 TUCP 0.61 3 2617704 2618151
TU374098 True 421 TUCP 0.63 2 2617704 2618151

Neighbor

gene id symbol gene type direction distance location
CI01000112_02585528_02607525 USP36 coding upstream 10036 2584929 ~ 2607668 (+)
CI01000112_02565726_02573879 TIMP2B coding upstream 43598 2565508 ~ 2574106 (+)
CI01000112_02541564_02549213 NA coding upstream 68260 2540950 ~ 2549444 (+)
CI01000112_02532994_02538052 NA coding upstream 79579 2530024 ~ 2538125 (+)
CI01000112_02503439_02516455 LGALS3BPA, LGALS3BPB coding upstream 101068 2502872 ~ 2516636 (+)
CI01000112_02659891_02661832 NA coding downstream 41740 2659891 ~ 2662015 (+)
CI01000112_02740099_02758394 CYTH1, CYTH1A, CYH1 coding downstream 121948 2740099 ~ 2758394 (+)
CI01000112_02774549_02777028 SOCS3, SOCS3A coding downstream 155305 2773456 ~ 2778631 (+)
CI01000112_02992698_02995752 NA coding downstream 371670 2989821 ~ 2996663 (+)
CI01000112_03085161_03094204 HID1 coding downstream 467010 3085161 ~ 3094406 (+)
G329098 NA non-coding upstream 75407 2541667 ~ 2542297 (+)
G329067 NA non-coding upstream 192506 2423842 ~ 2425198 (+)
G329080 NA non-coding upstream 204991 2412411 ~ 2412713 (+)
G329079 NA non-coding upstream 206984 2410495 ~ 2410720 (+)
G329025 NA non-coding upstream 334794 2282689 ~ 2282910 (+)
G329097 NA non-coding downstream 32223 2650374 ~ 2653361 (+)
G329145 NA non-coding downstream 154350 2772501 ~ 2772741 (+)
G329151 NA non-coding downstream 166889 2785040 ~ 2785269 (+)
G329153 NA non-coding downstream 170276 2788427 ~ 2788857 (+)
G329101 NA non-coding downstream 244934 2863085 ~ 2868729 (+)
G328456 NA other upstream 1384586 1232022 ~ 1233118 (+)
G329194 NA other downstream 302103 2920254 ~ 2931889 (+)
CI01000112_05076817_05101845 NA other downstream 2466569 5076817 ~ 5101845 (+)

Expression


Co-expression Network