Gene
RNA
| Item | Value |
|---|---|
| gene id | G329194 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000112 |
| NCBI id | null |
| chromosome length | 5247617 |
| location | 2920254 ~ 2931889 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU374184 | True | 666 | TUCP | 0.45 | 2 | 2920254 | 2931889 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000112_02774549_02777028 | SOCS3, SOCS3A | coding | upstream | 141623 | 2773456 ~ 2778631 (+) |
| CI01000112_02740099_02758394 | CYTH1, CYTH1A, CYH1 | coding | upstream | 161860 | 2740099 ~ 2758394 (+) |
| CI01000112_02659891_02661832 | NA | coding | upstream | 258239 | 2659891 ~ 2662015 (+) |
| CI01000112_02585528_02607525 | USP36 | coding | upstream | 312586 | 2584929 ~ 2607668 (+) |
| CI01000112_02565726_02573879 | TIMP2B | coding | upstream | 346148 | 2565508 ~ 2574106 (+) |
| CI01000112_02992698_02995752 | NA | coding | downstream | 57932 | 2989821 ~ 2996663 (+) |
| CI01000112_03085161_03094204 | HID1 | coding | downstream | 153272 | 3085161 ~ 3094406 (+) |
| CI01000112_03100235_03105799 | USH1G, USH1GA | coding | downstream | 167559 | 3099448 ~ 3106273 (+) |
| CI01000112_03112349_03117520 | NA | coding | downstream | 180460 | 3112349 ~ 3117587 (+) |
| CI01000112_03192658_03204707 | MHC1ZBA | coding | downstream | 259772 | 3191661 ~ 3205032 (+) |
| G329190 | NA | non-coding | upstream | 2086 | 2917949 ~ 2918168 (+) |
| G329184 | NA | non-coding | upstream | 18852 | 2901186 ~ 2901402 (+) |
| G329101 | NA | non-coding | upstream | 51525 | 2863085 ~ 2868729 (+) |
| G329153 | NA | non-coding | upstream | 131397 | 2788427 ~ 2788857 (+) |
| G329151 | NA | non-coding | upstream | 134985 | 2785040 ~ 2785269 (+) |
| G329197 | NA | non-coding | downstream | 14453 | 2946342 ~ 2949164 (+) |
| G329195 | NA | non-coding | downstream | 95128 | 3027017 ~ 3048993 (+) |
| G329276 | NA | non-coding | downstream | 135942 | 3067831 ~ 3072729 (+) |
| G329277 | NA | non-coding | downstream | 166031 | 3097920 ~ 3098296 (+) |
| G329307 | NA | non-coding | downstream | 278252 | 3210141 ~ 3211831 (+) |
| G329125 | NA | other | upstream | 302103 | 2617704 ~ 2618151 (+) |
| G328456 | NA | other | upstream | 1687136 | 1232022 ~ 1233118 (+) |
| CI01000112_05076817_05101845 | NA | other | downstream | 2152831 | 5076817 ~ 5101845 (+) |
