G329192


Basic Information

Item Value
gene id G329192
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 2927424 ~ 2930886 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU374175
ATTCATAAGCCCTCTATAAAAAATTGTAATACTAAACCACGTTTACAGTTGATACTCATAAAGTATTTTTTTTGTAAAATGTTTACCCCAAAATCAAACCTTACTTTACACATGTACAATCTTTACAATGTTTCAAAGCAAAGAACAGAAAAAAATACAATGGAACAAAATAAACAGATATAAAGATATACATAATTTTTCATTAACAAAGTTAGAACATCTCATGTATCAGAGACTCTTGGACAAGCGGAATATTAAGTACATGCCTTTTGGCATAAAGAAAGCTGCTTAGTAGGACAGACGTTCCTGCGTCCTCCTTATCACTTCCTGTTACCCACCAGCCTTTGCAAAAAGCTTAGAAATGCTGAGTGCCGTTCAAATATTTAGCCAAAGTAGTATTGCACCTTTGCCATGAACAAGTGACCTGCTCTTGTAACATATCAGACGTGCTGACCTGAATATCCTTGCTCCCTCTGCAACAAAACACTTTTGACCTTCATTTGGGAACACTAATTAAGTTTCTCCCCTGATTTAAAAGGAGATTGTGTCTAACAGCAACTCTGAATCTGTGTGTAACGATTAGAGCTGTGTGACTTACAGACAGGTCCTTAGATAATATGCATGCTTAACGTATGCTAAGTACATTCACAACTCTATCCAGTGCCCTCTTGTGTCAAAACAGTCAAACATAAAGGCAGAGTACAAAAAAGGCACACATACTTGCGCGCGCGCACACACACACACACACACACACACGACAATTTTATATAAACCTTGCTCTGATTACAAGTTTTTTTTAGTTTTTTAAATAAACAAAACTAATCAAATCCTAATACATATCAATTATACTGGTTTTATAATGTCAAACTATTAATGGGGAACAAGTCATAAGCCCAGGCTATATTCAGAATGGAATATCAGCTTTGTACTTAGTAAATATGGTGAAGTATGGAAGCTTTTTTCCGCCACTGAATAAAAAATAAAAAAGGTAATTATGACTTTTTATCTCACAATTCTGACTTTTTTTTAAAGTAAGAATTGCAAGATATAAACACGCAATTGCGAGATATAAAGTTAGAATTGTGAGCAATAGTTGTAATTGCGTGTTATAGTCAGAACTGTGAGATATTAACTCACAATTGCGAGTTGTAAAGTCTGAATCGCGAGATATAAAGTGTGAATTGCGAGATACATATGTGCAATTCTGAGAAAAAAGTCAGAATTGCAAGAAAAAAAGTCAGAAATGCAAGATATTAAGTTGCAATTGCGTGTTATAAAGTCAGAATTGTGAGCTATAAAGTCGTAATTGCAAGATATAAAGTCCGAATTGCAAAATACAAACTTGCACTTGCAAGAAAAAAAGTCAGAATTGCAAGATATAAACTTGCAATTGCAAGATATAGAGTCAGCCTTTTTTCCCCTCAGAATTGAACTTTGTAATTGACTTTTTTTTTCTCACAATTGCAAGTTTATATCTCGCAATTCTGAGAAAAAAGTCAGAATTGCGAGATATATACTTGCAATTGTGAGAAGAAAAAAAAAATCATAATTGTGAGATAAAAAGTCGCAATTTTTTTATTTTTTATTCAGTGGCGGAAACAAGCTTCCACAGTGAAGTGTATACTGTTTACTGCTTGCTATTTTTTTGAAAATAGCAAGTGCTTGTTTAATGCAGCAAGTTATTGAAAATAAAAACCCAATTTTGTGTGTAATTTACATTTGGCTTTCTGATCAAATGATGAGCTAAGAAAGAGAGAGCTGTGCTTCTGGTTCAGACATCACACTGGAAATGAAAGGTCAAGTTGAGCGCACTGTATTGTGGGATACAGTATTCCGTGCTCTGTTGTATACTGCACATTTTGGCAAATGTGGTACTGTAGGTCCTCCAGGTATACAGAAAATATGCATTCTGTGTACAGCATACATACTATATACTCCAGCAGAAAGAGAAGTATGCTATTCTAAATATAGCCTTGTATATGCTTTCCTTTTGGGCTCTCTGCAATAAGCAAATTGCAAGGCCAAACGTGACCATGGGGACATTCTGGTAGTCCATTTGTAAATCTAAAAGGATGGGGTAAACGGTCAGGAAACAGAGGGGTCAGTGAATGGCGTCACTTCCCCTGCAGGGCTGGAGCAGTTGTCAATGGGGTGGCAAGAGGTGAAGGTCTGACTGTAGCTCAAGCCACATGAACATTAGTGCCACATTTTTGGGTCAAATAGATTGCGGCAAATAAGACATTTTCATCATGATCCATTGGTTTTGTAATAAAACAGTAACACTGACAATAAATAAACACTAATGATAAAACAACTTAAAAAAAAAAAAAATACATATATATAATACTTGAACAATACAGTGAAGATTGCATAATCAGAAACGACCATTTTTGGCACAAAAGAAGAATGCTGTGATTGTGTGAGCCTTTCAAACAGTGGATGCTCCTTCATGCATGAATGCGATTGTCCCTCACAGTGAAAAATGAGTGCATGGAGTACAGTCTGACTGTACGCCAACTTCTCTACGAACTCCAGCTGTGCCTAGTGCTCGAACAATCCCTTGCTTTTAGTGCCCTGACCCTGGGATACTAAGATAAAGAATCAGGTGTATTTCACCGTTAGCAGAAATACCCCTTTTGATGGGTGCTAAATTTAAAAATGAGCAAAGAAATATGTAAATACAGTGCAGGATGCATTTGAAAACAAAAGAAATGCATCAGATACAGTAATAACACATGTCGGAATTCTTTTTCAGGTTCTTCTGGTATTACATACCAGCGTTTTAGGTGAATCTCACAAATTCGGTCAGGAACAAACAAATCATTGTGTCCAGGTAGACTTTCTGATTTTTATGAATGTATTATATTTATGGGAATGACAATTTTCCCACATTACAGCAATGACAGTTTGGGGGTTTAAACTGCATCAGTTTATGCAAAGCGAAGAATTTCTTTATGATTTTGAAGTGAATTATGGCCTGGACATTTCTTTATGAGATTCACCCTTTTACTCTCCTTATTTGTAGACTCACATGATTAAATTCAATCACTCATGTCAAATTACTACTCATAATAAAATCTGTAGAATGATTTTAAAGTGTCAATACTTGTTTCCCTTTGTTTTAACATTAAAGTGTTGAGTCTGCAAACATAAGCAACAACAAATTGGAGTAAGACATTAGAGGAACAAATGCCCAAAGTGCAGCCGATAAAAGGATGGCATCCCATGTAACCCCTCTCCCTGAAATAGAGAACAGGGCAGGGACGCCTCCTCTCTCACTGTATCAGCAGGCCGTGTGCAGTGCAATGCATACATCATCAGTTCACCCTCTCACAGAAATCAACAACTACTAGATCACCCACTTATACAAAAATAAATCAATCAAAACATGGCAAGATAAGCCTCTGTACATTACACTTATATAAAATAGCTTTGAATATTTA
>TU374177
ATTCATAAGCCCTCTATAAAAAATTGTAATACTAAACCACGTTTACAGTTGATACTCATAAAGTATTTTTTTTGTAAAATGTTTACCCCAAAATCAAACCTTACTTTACACATGTACAATCTTTACAATGTTTCAAAGCAAAGAACAGAAAAAAATACAATGGAACAAAATAAACAGATATAAAGATATACATAATTTTTCATTAACAAAGTTAGAACATCTCATGTATCAGAGACTCTTGGACAAGCGGAATATTAAGTACATGCCTTTTGGCATAAAGAAAGCTGCTTAGTAGGACAGACGTTCCTGCGTCCTCCTTATCACTTCCTGTTACCCACCAGCCTTTGCAAAAAGCTTAGAAATGCTGAGTGCCGTTCAAATATTTAGCCAAAGTAGTATTGCACCTTTGCCATGAACAAGTGACCTGCTCTTGTAACATATCAGACGTGCTGACCTGAATATCCTTGCTCCCTCTGCAACAAAACACTTTTGACCTTCATTTGGGAACACTAATTAAGTTTCTCCCCTGATTTAAAAGGAGATTGTGTCTAACAGCAACTCTGAATCTGTGTGTAACGATTAGAGCTGTGTGACTTACAGACAGGTCCTTAGATAATATGCATGCTTAACGTATGCTAAGTACATTCACAACTCTATCCAGTGCCCTCTTGTGTCAAAACAGTCAAACATAAAGGCAGAGTACAAAAAAGGCACACATACTTGCGCGCGCGCACACACACACACACACACACACACGACAATTTTATATAAACCTTGCTCTGATTACAAGTTTTTTTTAGTTTTTTAAATAAACAAAACTAATCAAATCCTAATACATATCAATTATACTGGTTTTATAATGTCAAACTATTAATGGGGAACAAGTCATAAGCCCAGGCTATATTCAGAATGGAATATCAGCTTTGTACTTAGTAAATATGGTGAAGTATGGAAGCTTTTTTCCGCCACTGAATAAAAAATAAAAAAGGTAATTATGACTTTTTATCTCACAATTCTGACTTTTTTTTAAAGTAAGAATTGCAAGATATAAACACGCAATTGCGAGATATAAAGTTAGAATTGTGAGCAATAGTTGTAATTGCGTGTTATAGTCAGAACTGTGAGATATTAACTCACAATTGCGAGTTGTAAAGTCTGAATCGCGAGATATAAAGTGTGAATTGCGAGATACATATGTGCAATTCTGAGAAAAAAGTCAGAATTGCAAGAAAAAAAGTCAGAAATGCAAGATATTAAGTTGCAATTGCGTGTTATAAAGTCAGAATTGTGAGCTATAAAGTCGTAATTGCAAGATATAAAGTCCGAATTGCAAAATACAAACTTGCACTTGCAAGAAAAAAAGTCAGAATTGCAAGATATAAACTTGCAATTGCAAGATATAGAGTCACAATTCTGAGAAAAAAGTCAGCCTTTTTTCCCCTCAGAATTGAACTTTGTAATTGACTTTTTTTTTCTCACAATTGTGAGATAAAAAGTCGCAATTTTTTTATTTTTTATTCAGTGGCGGAAACAAGCTTCCACAGTGAAGTGTATACTGTTTACTGCTTGCTATTTTTTTGAAAATAGCAAGTGCTTGTTTAATGCAGCAAGTTATTGAAAATAAAAACCCAATTTTGTGTGTAATTTACATTTGGCTTTCTGATCAAATGATGAGCTAAGAAAGAGAGAGCTGTGCTTCTGGTTCAGACATCACACTGGAAATGAAAGGTCAAGTTGAGCGCACTGTATTGTGGGATACAGTATTCCGTGCTCTGTTGTATACTGCACATTTTGGCAAATGTGGTACTGTAGGTCCTCCAGGTATACAGAAAATATGCATTCTGTGTACAGCATACATACTATATACTCCAGCAGAAAGAGAAGTATGCTATTCTAAATATAGCCTTGTATATGCTTTCCTTTTGGGCTCTCTGCAATAAGCAAATTGCAAGGCCAAACGTGACCATGGGGACATTCTGGTAGTCCATTTGTAAATCTAAAAGGATGGGGTAAACGGTCAGGAAACAGAGGGGTCAGTGAATGGCGTCACTTCCCCTGCAGGGCTGGAGCAGTTGTCAATGGGGTGGCAAGAGGTGAAGGTCTGACTGTAGCTCAAGCCACATGAACATTAGTGCCACATTTTTGGGTCAAATAGATTGCGGCAAATAAGACATTTTCATCATGATCCATTGGTTTTGTAATAAAACAGTAACACTGACAATAAATAAACACTAATGATAAAACAACTTAAAAAAAAAAAAAATACATATATATAATACTTGAACAATACAGTGAAGATTGCATAATCAGAAACGACCATTTTTGGCACAAAAGAAGAATGCTGTGATTGTGTGAGCCTTTCAAACAGTGGATGCTCCTTCATGCATGAATGCGATTGTCCCTCACAGTGAAAAATGAGTGCATGGAGTACAGTCTGACTGTACGCCAACTTCTCTACGAACTCCAGCTGTGCCTAGTGCTCGAACAATCCCTTGCTTTTAGTGCCCTGACCCTGGGATACTAAGATAAAGAATCAGGTGTATTTCACCGTTAGCAGAAATACCCCTTTTGATGGGTGCTAAATTTAAAAATGAGCAAAGAAATATGTAAATACAGTGCAGGATGCATTTGAAAACAAAAGAAATGCATCAGATACAGTAATAACACATGTCGGAATTCTTTTTCAGGTTCTTCTGGTATTACATACCAGCGTTTTAGGTGAATCTCACAAATTCGGTCAGGAACAAACAAATCATTGTGTCCAGGTAGACTTTCTGATTTTTATGAATGTATTATATTTATGGGAATGACAATTTTCCCACATTACAGCAATGACAGTTTGGGGGTTTAAACTGCATCAGTTTATGCAAAGCGAAGAATTTCTTTATGATTTTGAAGTGAATTATGGCCTGGACATTTCTTTATGAGATTCACCCTTTTACTCTCCTTATTTGTAGACTCACATGATTAAATTCAATCACTCATGTCAAATTACTACTCATAATAAAATCTGTAGAATGATTTTAAAGTGTCAATACTTGTTTCCCTTTGTTTTAACATTAAAGTGTTGAGTCTGCAAACATAAGCAACAACAAATTGGAGTAAGACATTAGAGGAACAAATGCCCAAAGTGCAGCCGATAAAAGGATGGCATCCCATGTAACCCCTCTCCCTGAAATAGAGAACAGGGCAGGGACGCCTCCTCTCTCACTGTATCAGCAGGCCGTGTGCAGTGCAATGCATACATCATCAGTTCACCCTCTCACAGAAATCAACAACTACTAGATCACCCACTTATACAAAAATAAATCAATCAAAACATGGCAAGATAAGCCTCTGTACATTACACTTATATAAAATAGCTTTGAATATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU374175 False 3443 lncRNA 0.36 2 2927424 2930886
TU374177 True 3375 lncRNA 0.36 2 2927424 2930886

Neighbor

gene id symbol gene type direction distance location
CI01000112_02774549_02777028 SOCS3, SOCS3A coding upstream 148793 2773456 ~ 2778631 (+)
CI01000112_02740099_02758394 CYTH1, CYTH1A, CYH1 coding upstream 169030 2740099 ~ 2758394 (+)
CI01000112_02659891_02661832 NA coding upstream 265409 2659891 ~ 2662015 (+)
CI01000112_02585528_02607525 USP36 coding upstream 319756 2584929 ~ 2607668 (+)
CI01000112_02565726_02573879 TIMP2B coding upstream 353318 2565508 ~ 2574106 (+)
CI01000112_02992698_02995752 NA coding downstream 58935 2989821 ~ 2996663 (+)
CI01000112_03085161_03094204 HID1 coding downstream 154275 3085161 ~ 3094406 (+)
CI01000112_03100235_03105799 USH1G, USH1GA coding downstream 168562 3099448 ~ 3106273 (+)
CI01000112_03112349_03117520 NA coding downstream 181463 3112349 ~ 3117587 (+)
CI01000112_03192658_03204707 MHC1ZBA coding downstream 260775 3191661 ~ 3205032 (+)
G329190 NA non-coding upstream 9256 2917949 ~ 2918168 (+)
G329184 NA non-coding upstream 26022 2901186 ~ 2901402 (+)
G329101 NA non-coding upstream 58695 2863085 ~ 2868729 (+)
G329153 NA non-coding upstream 138567 2788427 ~ 2788857 (+)
G329151 NA non-coding upstream 142155 2785040 ~ 2785269 (+)
G329197 NA non-coding downstream 15456 2946342 ~ 2949164 (+)
G329195 NA non-coding downstream 96131 3027017 ~ 3048993 (+)
G329276 NA non-coding downstream 136945 3067831 ~ 3072729 (+)
G329277 NA non-coding downstream 167034 3097920 ~ 3098296 (+)
G329307 NA non-coding downstream 279255 3210141 ~ 3211831 (+)
G329125 NA other upstream 309273 2617704 ~ 2618151 (+)
G328456 NA other upstream 1694306 1232022 ~ 1233118 (+)
CI01000112_05076817_05101845 NA other downstream 2153834 5076817 ~ 5101845 (+)

Expression


Co-expression Network