G330361


Basic Information

Item Value
gene id G330361
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 3974207 ~ 3974827 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU375522
CACAGCAGATGGCTGATGACAAAAGCACTGCCCTCCAGACACGTCTGCGCCATCATTCTTCAGATTTCTATGAAGGATGTTGAATGCAGTAACTAAGAAGCAACAATATCTCATTCCCTACTCAGGGAACCATGGTTACATACAGTATGTGACAAAGAAGTTGCTTTTCATAGGTTCACTCAACTCTGCGTCAGTTGCTATAATAATATAATATAATATAATAAAGACATGTTTTGAGACTGGCAGAGACAACAGCACAGAATAAAGATGCTCATACCAGCCTCCTATGATTCTGCTGCTGCCTCAGAAGATGCAGTAGTCCAATGCGGCGGCTACACACTGTCATGTTGTAAATAAGACAACATCTGTATTGAAAACCCCTCCATGTTGCGGTTGTTGTTGTTGTTGTTTTTGGCATGTAGCTACCAACAAAATGTCATTACCATAGAAACCAATGCAGATAATCCGGAAAACGAAAGAGCGGCATGGACACACAAATCAAATCTGAACAGTTGTGATACACAATGTGAACAGTCAATAATTTAGATCAGATTTCAATCAGATACACAAATAATCAGATTTGGACTGACAGTGTGAACGTAGCCTATGAGTTCAACCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU375522 True 621 lncRNA 0.40 1 3974207 3974827

Neighbor

gene id symbol gene type direction distance location
CI01000112_03569282_03569449 NA coding downstream 404424 3569117 ~ 3569783 (-)
CI01000112_03506254_03517454 NA coding downstream 456576 3504455 ~ 3518742 (-)
CI01000112_03393172_03448154 PRKCA coding downstream 526053 3391852 ~ 3448154 (-)
CI01000112_03367247_03384263 CACNG5B, CACNG5, CACNG5A coding downstream 588323 3366873 ~ 3385884 (-)
CI01000112_03291919_03299963 RAC3B, RAC3, RAC3A, RAC1, RAC1A, RAC1B, RAC3.S, RAC1.L coding downstream 674244 3291241 ~ 3299963 (-)
CI01000112_04031927_04033721 NA coding upstream 57013 4031840 ~ 4033830 (-)
CI01000112_04095809_04175244 NA coding upstream 120453 4095280 ~ 4175284 (-)
CI01000112_04190915_04191720 NA coding upstream 215897 4190724 ~ 4191720 (-)
CI01000112_04249185_04251352 GPRC5BA, GPRC5B coding upstream 274327 4249154 ~ 4251394 (-)
CI01000112_04289359_04311224 PROZA coding upstream 314090 4288917 ~ 4311224 (-)
G329976 NA non-coding downstream 90883 3882235 ~ 3883324 (-)
G329985 NA non-coding downstream 114017 3778362 ~ 3860190 (-)
G330010 NA non-coding downstream 122582 3560174 ~ 3851625 (-)
G330329 NA non-coding downstream 131749 3837999 ~ 3842458 (-)
G330311 NA non-coding downstream 187059 3786743 ~ 3787148 (-)
G330362 NA non-coding upstream 5 3974832 ~ 3975353 (-)
G330363 NA non-coding upstream 841 3975668 ~ 3976088 (-)
G329987 NA non-coding upstream 16154 3990981 ~ 3993589 (-)
G329970 NA non-coding upstream 60779 4035606 ~ 4038297 (-)
G330377 NA non-coding upstream 123749 4098576 ~ 4098829 (-)
G330301 NA other downstream 205602 3758244 ~ 3773774 (-)
CI01000112_03068505_03072256 NA other downstream 901477 3067320 ~ 3072879 (-)
G329672 NA other downstream 1954754 2016704 ~ 2019453 (-)
G329569 NA other downstream 1976348 1991666 ~ 1997859 (-)

Expression


Co-expression Network