XLOC_011242 (BX927406.1)


Basic Information

Item Value
gene id XLOC_011242
gene name BX927406.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 8090357 ~ 8090474 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022440
TTCGCcaacagctagctctctgcaactctcacatggtcgccaactgaagctaagcagggctgcacccggtcagtacctggatgggagactacatgggaaagctaggttgctgccgaag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104212

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022440 True 118 rRNA 0.56 1 8090357 8090474

Neighbor

gene id symbol gene type direction distance location
XLOC_011241 ccdc170 coding upstream 248148 7821890 ~ 7842209 (+)
XLOC_011240 akap12a coding upstream 306769 7763630 ~ 7783588 (+)
XLOC_011239 BX088649.1 coding upstream 343197 7741616 ~ 7747160 (+)
XLOC_011238 BX511121.2 coding upstream 429033 7661208 ~ 7661324 (+)
XLOC_011237 fbxo30a coding upstream 461899 7620220 ~ 7628458 (+)
XLOC_011243 myct1b coding downstream 85524 8175998 ~ 8179152 (+)
XLOC_011244 tulp4b coding downstream 92919 8183393 ~ 8211012 (+)
XLOC_011245 slc18b1 coding downstream 121518 8211992 ~ 8228712 (+)
XLOC_011246 NA coding downstream 135181 8225655 ~ 8229883 (+)
XLOC_011247 si:ch211-236p5.2 coding downstream 180390 8270864 ~ 8287309 (+)
XLOC_011232 NA non-coding upstream 643576 7446509 ~ 7446781 (+)
XLOC_011231 CABZ01057751.1 non-coding upstream 770192 7320042 ~ 7320165 (+)
XLOC_011230 NA non-coding upstream 861345 7226730 ~ 7229012 (+)
XLOC_011249 BX248131.2 non-coding downstream 209916 8300390 ~ 8300504 (+)
XLOC_011250 NA non-coding downstream 218116 8308590 ~ 8315457 (+)
XLOC_011252 FO818681.1 non-coding downstream 381627 8472101 ~ 8472217 (+)
XLOC_011259 NA non-coding downstream 1826289 9916763 ~ 9942723 (+)

Expression


Co-expression Network