G330598


Basic Information

Item Value
gene id G330598
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000112
NCBI id null
chromosome length 5247617
location 4805252 ~ 4845255 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU375792
ATGTAATCAGCAGAGTCGCGTATCTCGTCCTGCTGATTTCTCATGCAACATCGATGCACTGCATTCTGATCATTCTTTTGGTGCTGTTTGTCCCAGTTTTGTCTTGTCCCAGGCCCAGTAAAGCAACTTTGAGTGACCATCCACCTGATCTCAGCCTGAATTATTCCATCCAACACACACACAGTCACACAAATATGGAGTGACGGCAGAAGGTCTGGACTCCATCGCAGCTTTCATTGGCCAAGGACCTCCCAGAGGCTGTCTGACTGACATGTGAACCATTAAAGAACGCAGCACGCACGTCTCCCGGACATCCTGTAGAATTCGACCAGATGACGACTTCGGAACTCCTGATGCCACATGCATCCAGCCAATGGTCCGTGGGCATGACATCTAAGCCTGAGACTAGGACTCAGTCGGGCCTCCCAGGAAGCGAGCTAATGCCATTCCTTTAGACCAGGTGTAATGTTACATGAGCAAGTTTGTTTAAAGCCTGGCCAAAATCTCAACCCAGAGAGTGATATGATCAGTACATCCTGTGAGATTGCGATGAGCCTGAGAGGAGATGATCTGAGAGGTCGAGCAGATCAGAGGAGGCAGATGACATCGTCCCGGCCATCATGATGAAACCGTAATCCTGTGATCAAAGAGCAGCATACCAGCCGTATGCTCTTCAATCAGCTCGCTGAAACAGACGATTCTCAAACTGTATTACACCGGCTGCAGGACGAGCAAAATGGCCTTAGAAATGGGGACTTTTACATTTATTAATGCTGTTAAATGTTTGCGAAAATCAGATTTCATTTTAATAAAAGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU375792 True 818 lncRNA 0.47 6 4805252 4845255

Neighbor

gene id symbol gene type direction distance location
CI01000112_04579149_04582002 NA coding upstream 223088 4579149 ~ 4582164 (+)
CI01000112_04561557_04563086 NA coding upstream 242062 4561455 ~ 4563190 (+)
CI01000112_04346478_04353682 NA coding upstream 450953 4345703 ~ 4354299 (+)
CI01000112_04264297_04265684 NA coding upstream 539280 4263713 ~ 4265972 (+)
CI01000112_04055598_04089942 NA coding upstream 714716 4055598 ~ 4090536 (+)
CI01000112_04918167_04937803 NA coding downstream 72726 4917981 ~ 4938884 (+)
CI01000112_05076817_05101845 NA coding downstream 231562 5076817 ~ 5101845 (+)
CI01000112_05102672_05120797 NA coding downstream 257417 5102672 ~ 5120871 (+)
CI01000112_05163850_05164401 NA coding downstream 318595 5163850 ~ 5164530 (+)
CI01000112_05172320_05174322 NA coding downstream 326933 5172188 ~ 5174477 (+)
G330616 NA non-coding upstream 83560 4721400 ~ 4721692 (+)
G330595 NA non-coding upstream 90838 4640950 ~ 4714414 (+)
G330644 NA non-coding upstream 168793 4636239 ~ 4636459 (+)
G330643 NA non-coding upstream 174487 4630435 ~ 4630765 (+)
G330627 NA non-coding upstream 214216 4590768 ~ 4591036 (+)
G330704 NA non-coding downstream 5614 4850869 ~ 4851338 (+)
G330710 NA non-coding downstream 14447 4859702 ~ 4860397 (+)
G330729 NA non-coding downstream 106831 4952086 ~ 4953009 (+)
G330731 NA non-coding downstream 114451 4959706 ~ 4960119 (+)
G330773 NA non-coding downstream 178936 5024191 ~ 5024540 (+)
G329194 NA other upstream 1873363 2920254 ~ 2931889 (+)
G329125 NA other upstream 2187101 2617704 ~ 2618151 (+)
G328456 NA other upstream 3572134 1232022 ~ 1233118 (+)

Expression


Co-expression Network