CI01000113_01826332_01833431


Basic Information

Item Value
gene id CI01000113_01826332_01833431
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1825854 ~ 1833529 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01826332_01833431.mRNA
CTATAAAAACATCCATTCTTATCCATCATGTGCAACAAATACCTCTTTGCCACCAATCCTCAAAACAAAGATTTTCTTTGAATTCTTATTGAATATAAATTTGTCGGTCCATTTATCTGAGCAGACGCCAGGTTTGGTGACAGCACCACCTACTGGTCAAAAACAGTACCAGTTTATCCAACACTATCATCTACTGTAGATCATTTTAAATGTTCATGTAAACTGCTGCAGCTGCACAACACTTTGTTGAATGGTGTGTCTCTGTGACTGCCGGTGTAGATGTTGGTGGTGTGACACTGTGGGTCGAGCTCTAGATTATTAACACAAAGATTGTGGGTTTGAACCTGTATTGTCTTTTATGTTGTTGCATTGTCTATAATGTTGGCCTTTTTGACCCTGTAATGTTTCTTACATGGTCTAATAAATCAAAAAATACATTGATAATTTACCAGTGAGAGAATGAGATCATCTGTTGAAAATGTTTCAGAACTCATGCTCCCAAATTCCCAATAATTTTATATTGACAGATTTTCCCAAACCAACTCTGACTGTTGAGCCACAGAGTTCAGTGTTCACTGGAGACTCAGTTACTCTGAGATGTAAGGTGGATCCGCCACGGGATGGATGGGAGTTTCTCTGGAGTAAAAACTCAAACTCTGAATCTACTGAAGCTGCAACCAAAACAATCAATCGTGTGAAAGTCTCTGATGGAGGAGAGTACAGGTGCAGAGCACAAAGACAAGGATATTACACAGATTACACTGGTGTGATTCTGGAGAGTCCTGTTCATCCTGTGACTGAAGGAGATAATCTGACTCTACACTGTTTAGATAAACATACAAACCCATCAAACCTCAGAGCTGATTTCTATAAAGATGGATCACTCATCCAGAATCAAACTACAGAGATGATCATCCCTACTGTCTCAAAGTCACATGAGGGTTTCTACTACTGCAAACACCCAAAGAGAGGAGAGTCGCCCAAGAGCTGGATCTCAGTCAGAGGTGACAGTGTAAGATCTGAGTCTCCCTCTGCTGTCAGTCAACAGCAGAACATCAGTCAGACATCAGAGCAGAACCAGAGTGAAGACGGATACAAGACACTGCTGTCTGGAACTGCACACATCTATGACTCAGTTGACACAACTATTAATAGAGACAGAAGCACAGACGGTGAAAGTGGACCGACTGAGATCACATATGCTGAGATTGAAATGAAATCTACAAACAAACAGAAGAAAGAGAAAGAAAACAAAATCAAAAACACTGAGAGTTGTGACGGCCTGTACTCTGAACTGAAGCTGGAAACAGATCAAGGTGAGCGTCAAACTAAAAACATCACAATTCACAAGAAACCACTGAAAACTTCATCTACATGCATTATTGAGTGAAATGAAATTCTGTATATAAAAACTAGAAATGTGCATTTTGAATTCATTCATATATTTTCAGGTGCTGGATCTAGTGAAGTGACGTATGCTCAGATTAA

Function

NR:

description
leukocyte immune-type receptor TS32.15 L1.1a, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01826332_01833431.mRNA False 1488 mRNA 0.40 6 1825854 1833529

Neighbor

gene id symbol gene type direction distance location
CI01000113_01761054_01815819 NA coding upstream 9857 1760927 ~ 1815997 (+)
CI01000113_01716646_01752755 NA coding upstream 72503 1715749 ~ 1753351 (+)
CI01000113_01698764_01709585 NA coding upstream 116146 1698624 ~ 1709708 (+)
CI01000113_01691097_01696776 NA coding upstream 129078 1691062 ~ 1696776 (+)
CI01000113_01666106_01684663 NA coding upstream 141153 1666066 ~ 1684701 (+)
CI01000113_01834891_01839297 KCNJ2, KCNJ2A coding downstream 1362 1834891 ~ 1840126 (+)
CI01000113_01983091_01989335 NA coding downstream 149562 1983091 ~ 1989335 (+)
CI01000113_01994682_02001599 DNAAF5 coding downstream 161153 1994682 ~ 2002028 (+)
CI01000113_02042831_02055567 NA coding downstream 206469 2039998 ~ 2056124 (+)
CI01000113_02059842_02092732 SLC9A3R2 coding downstream 226313 2059842 ~ 2093663 (+)
G331790 NA non-coding upstream 44164 1733674 ~ 1781690 (+)
G331793 NA non-coding upstream 68876 1755457 ~ 1756978 (+)
G331756 NA non-coding upstream 187421 1638118 ~ 1638433 (+)
G331755 NA non-coding upstream 189194 1636151 ~ 1636660 (+)
G331840 NA non-coding downstream 22302 1855831 ~ 1856934 (+)
G331820 NA non-coding downstream 72890 1906419 ~ 1909070 (+)
G331824 NA non-coding downstream 164915 1998444 ~ 2057885 (+)
G331833 NA non-coding downstream 197309 2030838 ~ 2034228 (+)
G331907 NA non-coding downstream 238006 2071535 ~ 2072337 (+)
G331767 NA other upstream 162599 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 400148 1424968 ~ 1425835 (+)
G331615 NA other upstream 579281 1246291 ~ 1246573 (+)
G331487 NA other upstream 903721 917735 ~ 922133 (+)
G331470 NA other upstream 909317 913392 ~ 916537 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 509892 2342987 ~ 2346006 (+)
CI01000113_02548934_02576888 TBL3 other downstream 735238 2548934 ~ 2577790 (+)

Expression


Co-expression Network