CI01000113_01854931_01857730


Basic Information

Item Value
gene id CI01000113_01854931_01857730
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1854766 ~ 1858875 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01854931_01857730.mRNA
AATTTTCCCAGATGACATAACTTAAAAATACCATTGTATATTCCAAAGCTTTGTCAGCTCAGTTGGTCATGAACCCATAACACATATGTTCTTCCGTTGTCTCTGTGCGTGTTCATAAATTGTGCAAGCGTATTTTGTACATTAGATCGAAAGATCTGAAAAAACATACATTTACCTGCCCATAAACCCTCCCCTCAAAGAAATCAGGACAGAAGTGGTTGAAAGTGGACAAAAGAGACGAATTAAAATACCAAGTGTAAACGGGTATGTGTCTGCCTCGTCTACTTGTGATCCGATCGACAAAAAAGCATTTTAATACCAGGTGTAAACAGGCCCTAAGAAGAATTTTCTTAATTTGAAACCATATGTTCAAAACCAGAATTTCTAACTGATGTGGATGTACTACAGAAGGTAATGTGTGGTAAAGAAAATGTTTGAACCGACAGTTGTAGAAATAAAGGAAAGAGGAAATAAGTGATTTGGAGAAGTCCAGAAAGACAGGTCAACAAAGTCAGGAAAAGTATGGAACTAACGCACTATTAAAATAATATTCTAAAATATTAGAATATAACTAATGTCGCCCCTACGACGACATTAGTTATTAACATCTAGCCTACGACTGATTAAGAAGGGACCTAAAACAGAGGTGTCTTATCAAGGTGTGTTCATGAAAAAGTGAAATTTATGTTAACTGTAACATTATGTAAATAATTAAGGGAATGAATTAATACAAATTTAATTAATAATGATCATACCTGACATAGCTGTTACTACGGTGGCCGTCCTGCGTAGTAAATTATATTGGCGGTAATCGCAACAGCCATGGAAACAGGAGAACATGAAGGAAATAAACGTAAGAGAAATACGTTCATAAACTTTGGATACTTACTTGGAAGTTAGGAATAGGCACCGAGAAGAAACTCACTAATAAGTCCAAAAAAAATTGTTCTTGATTGGACTAAATCGCAAATATGATTTACCTCAGAACCCTCGCGTGCGGAGTGAGTTCATATTTCATCCAGTGAGTGGCAGTAACGCGCTGATGTGACGCTGATCTCAGCAGCGCAGAGGAAGTCGAGCAGGAACAACACACCACATGAGTTTACAGTCAGCTGGGGAAAACGCTGTTTAGATTAAAGTACACAATGAAACCAAAAAAACAACTCAAACAACAGAAGAATGAGAAGCATTTCAGTACAAAGAAGTCAAAGAAACATGCTGATCCTGCATCAGACGATCACCTCCAGCAGATTCCTCAACGTTTGCGTGAAATCATGAAGAGTAAAGAGATGATGAAACAAGGCTCCCAGAAAAGGAAAAAAGCCTCTAAACCAAAGATGGTCTCAGGAGATATTCCTATCCCACACTTCCGCAGAGGGCGACAGGAGTCAGAGAAAGCTTACATCCACCGCATGACCCAAGAGACTGAGCATGTCCTCTTCCTCACAAACAACCAGGTAGAGCGACAGCCAGAGGTCGAGCTAAAGAAAGAAGAGACAGAGAAAAAGAAATCAACTAAAAAGAATTGGCTAAATAAAGAGAAACTACGGCAGCAGAAAAAGAAGTTAAACCAGCAAGAGGAGCATGAGGTACCATTTGGAGAGGTGGCCATGGCGCCTCCATCACTGAGTGTTAAACCAAGGAAAGCCACAATCAAACCTCAGGGGGCGTCCAAAGGTCTTCTCCTGAACTCTCTCCTGGGTCACAGTCCTGTGTCGGTAACCAAACCCTCTATGGCGAGGAAGAGGATAATGGAAGAGGAGCGGGAGAGAGTGGTGCAGCTGTACAGACAGATGAAGCAGCAGCAGAGAGACAAACATGAGCGAGACAGGGCTGCCATGACCTCCACATGATGCTCTGCTTTTCGTATTATATAGTGTTCTATTATATCTATATGTATATTTCATTTTTCTATACATTTGTGCTACCTCTGCTGGTCAGCAATGCCATAATGATGAATTTTGCTGTGAAATATTTACAAGTGGATGTAGCAGGACTGTATAAAAGGCAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01854931_01857730.mRNA True 2018 mRNA 0.40 6 1854766 1858875

Neighbor

gene id symbol gene type direction distance location
CI01000113_01846674_01851715 BTBD17B coding downstream 2976 1846368 ~ 1851790 (-)
CI01000113_01652528_01653349 NA coding downstream 201320 1652386 ~ 1653446 (-)
CI01000113_01589305_01600983 NA coding downstream 253754 1589154 ~ 1601012 (-)
CI01000113_01569971_01571224 PTGER1C coding downstream 282964 1569308 ~ 1571802 (-)
CI01000113_01554726_01565897 SLC27A1A, SLC27A1 coding downstream 288869 1554144 ~ 1565897 (-)
CI01000113_01871256_01883265 PDGFAB coding upstream 11515 1870390 ~ 1884400 (-)
CI01000113_01908893_01913809 NA coding upstream 49864 1908739 ~ 1914228 (-)
CI01000113_01917876_01982420 PRKAR1B coding upstream 58411 1917286 ~ 1982420 (-)
CI01000113_02007178_02015572 NA coding upstream 148303 2007178 ~ 2015835 (-)
CI01000113_02127709_02131244 DHYS, DHPS coding upstream 268334 2127209 ~ 2131244 (-)
G332751 NA non-coding downstream 21461 1832400 ~ 1833305 (-)
G332670 NA non-coding downstream 22917 1831421 ~ 1831849 (-)
G332731 NA non-coding downstream 30334 1770014 ~ 1824432 (-)
G332666 NA non-coding downstream 116070 1709639 ~ 1738696 (-)
G332706 NA non-coding downstream 124439 1706219 ~ 1730327 (-)
G332657 NA non-coding upstream 158467 2017342 ~ 2017775 (-)
G332645 NA non-coding upstream 183964 2042839 ~ 2045887 (-)
G332679 NA non-coding upstream 251815 2110690 ~ 2112552 (-)
G332663 NA non-coding upstream 253810 2112685 ~ 2113398 (-)
G332160 NA other downstream 1407929 390227 ~ 446837 (-)
G332210 NA other downstream 1805281 47990 ~ 49485 (-)
G332649 NA other upstream 288339 2147214 ~ 2148558 (-)
G332837 NA other upstream 391970 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 508741 2356565 ~ 2370009 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026179 ccdc137 coding NC_007114.7 CM002887.2 12893141 ~ 12903609 (-)