CI01000113_01908893_01913809


Basic Information

Item Value
gene id CI01000113_01908893_01913809
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1908739 ~ 1914228 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01908893_01913809.mRNA
ACATCAATGCAGGAGAAGTGGAGGAGAAAATGCGTCAGTATTTATGCATCAAGGCAAATTAGATGGTATGGTATTTCTAAAAGAGACTGAGAGGTGGAGAGCCGCCCGCCCAGACGCCAGCACCAGACTTTACTGAACGTGAGTAAACAGCAAGTCAACAACATTGGTATCTCAGTTAACCCAAACTCTTAGATGTCCAATTGAGCTTGATGTCTTCAGGTGAAAATGGTAGCCTGTATGCATGATTTACCTGAGCTGTATGCTTGACTGAACAGGAATGTTTGTACTCTAGATGTTGAATAAGATATTGGCAGCGTGTCTGATTATTCATATTGGCAGCGAGGCAGTTCCACAGCTGTGAAGCTCTGTAACATAATGCCTTTCCATCAGCAGATGTTCGAATAGTACTTTAAAGAGGCATGCATCCTGTGATTGAAGGAGACAGAGAAGGCAATAGGGCATTTGGAGATCTTTCAGGTAGTCTTATAGGTAATATCACAGAGCTTGCATCTTCTACCAGGATGTTAAAGGTCAATGGGGTCAACTGTGTGTTGAAAGCTCCAAAGAGATCCAGTAGTGCTACATGTGAGATACAGCCATGGGCGGCGGACAGTGATATGTTATTGACTACTTCGACAAGTGCTGTTTCAGTCTTCAGCAACAGTGGATTAGAACTGGGTACAGCGTCTGTTCTGCAGCGCAGGTCTGATAATGAGGAATATGTTGAAGTGGGCCGCCTGGGTCCGTCTGACTACTTCGGTGAGATAGCCCTGCTGTTGAACAGACCGCGTGCAGCCACAGTCGTGGCCAGGGGTCCGCTGAAGTGTGTGAAGCTGGACCGGCCACGTTTCGAGCGTGTCCTGGGGCCCTGCTCTGAGATCCTCAAGAGGAACATTCAGAGATATAACAGTTTCATTTCTCTCACAGTCTAACCCGGCCATCTGACACATGTCTAGAGGTTACATACCTCCGTCAGGTTACTCTGGTGCCTGGTTGCATAAAATAATGTGTGTGGTACTTCATCAGTTTTGCTTAAATCATTAGCTTAACTATAGTTAAGTTGCTCTGAATGTGGCAACTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01908893_01913809.mRNA True 1086 mRNA 0.46 4 1908739 1914228

Neighbor

gene id symbol gene type direction distance location
CI01000113_01871256_01883265 PDGFAB coding downstream 24339 1870390 ~ 1884400 (-)
CI01000113_01854931_01857730 NA coding downstream 49864 1854766 ~ 1858875 (-)
CI01000113_01846674_01851715 BTBD17B coding downstream 56949 1846368 ~ 1851790 (-)
CI01000113_01652528_01653349 NA coding downstream 255293 1652386 ~ 1653446 (-)
CI01000113_01589305_01600983 NA coding downstream 307727 1589154 ~ 1601012 (-)
CI01000113_01917876_01982420 PRKAR1B coding upstream 3058 1917286 ~ 1982420 (-)
CI01000113_02007178_02015572 NA coding upstream 92950 2007178 ~ 2015835 (-)
CI01000113_02127709_02131244 DHYS, DHPS coding upstream 212981 2127209 ~ 2131244 (-)
CI01000113_02136165_02143106 NA coding upstream 221096 2135324 ~ 2143106 (-)
CI01000113_02159290_02165087 SLC25A19 coding upstream 244482 2158710 ~ 2165087 (-)
G332751 NA non-coding downstream 75434 1832400 ~ 1833305 (-)
G332670 NA non-coding downstream 76890 1831421 ~ 1831849 (-)
G332731 NA non-coding downstream 84307 1770014 ~ 1824432 (-)
G332666 NA non-coding downstream 170043 1709639 ~ 1738696 (-)
G332706 NA non-coding downstream 178412 1706219 ~ 1730327 (-)
G332657 NA non-coding upstream 103114 2017342 ~ 2017775 (-)
G332645 NA non-coding upstream 128611 2042839 ~ 2045887 (-)
G332679 NA non-coding upstream 196462 2110690 ~ 2112552 (-)
G332663 NA non-coding upstream 198457 2112685 ~ 2113398 (-)
G332160 NA other downstream 1461902 390227 ~ 446837 (-)
G332210 NA other downstream 1859254 47990 ~ 49485 (-)
G332649 NA other upstream 232986 2147214 ~ 2148558 (-)
G332837 NA other upstream 336617 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 453388 2356565 ~ 2370009 (-)

Expression


Co-expression Network