CI01000113_01917876_01982420 (PRKAR1B)


Basic Information

Item Value
gene id CI01000113_01917876_01982420
gene name PRKAR1B
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1917286 ~ 1982420 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01917876_01982420.mRNA
TCAGTATCAGTGTCAGTGTCCAATCGGGAGACGGATTGACGTCATAGTGCTCGCGAGCAGCAGGACCAAACAAGCAACATCCCAGAGCGCGAGCCTTGCATCTCCGCCTCATAACGAGATAGAAGATAAGATGGCCACCTCCTCCTCCAATCTGGAAGAAGATGAAAGTCTGAAAGGCTGTGAGGTTTTCGTGCAGAAACACAACATACAGCAGATCCTCAAAGAGTGCATCGTCAACCTGTGCATCGCCAAGCCCGAGCGGCCTATGAAGTTCCTGCGGGAACACTTTGAAAAGCTGGAGAAGGTTCTGTGTACAGATCTTATGAAAGTCACAGCAGTCATTCGTTTAGCTGGAGGTGCCAGTAACCGCATCCACACTCAGCAGCAACTGAACATCTTCTTTGATCATGTGCTCCAGGAACAACGGGCTTTTTCATACTCGCAGATGCTTGGGGCTTGGGCTTTTGTTAGGAATGGGTTTCTGCTGAGCTTCTGCTGGTTTAGTGAAATCTCAGTGCTGTTGTGTCTGCTGTCTGTGCACACAGAAGAATGCAAGCAGATCATGGCCCGTCAGAAGTCCAATTCGCAGTCGGACTCTCACGATGATGAAGTGTCTCCTCCTCCTCCAAACCCGGTGGTGAAGGCCAGGCGCCGGAGAGGTGGGGTCAGTGCTGAAGTCTACACAGAGGAGGATGCCGTCAGCTACGTCAGAAAGGTCATTCCAAAGGACTACAAGACAATGACCGCGCTGGCCAAAGCCATCTCTAAGAATGTGCTGTTTGCCCACCTAGATGACAATGAGAGAAGGAAGCTGCGATATTTGGCTGTGATGTGGACCGCTTTTGGGAGGCACTTGACAGCTTCCACACAGAGATTGGCGTCTGCCATTGAAAAAACCCATGCCAGTCAAGCACTACTTCAGTGTCCAGATGCCATTGCTTGTGAAACAAGTGACATATTTGATGCCATGTTCCCGGTCACTCACATCGCTGGGGAAACGGTAATCCAGCAAGGTGATGAAGGAGACAACTTCTATGTGATTGATCAAGGAGAAGTTGATATTGTGTCGTATCAAGCTCTTGGGTCAGACCCAGAGCGCAGAGAGCCCAGGCACAGAGCCCGACTCGCTCAATCCACTGTGCACCACACTAGTGCTGTCAAACACATGCAAAATACATGTTTACAGACATTATCCAGTCTTCTCATATGTGTAAGTGTGCACACTCAGCTCCATAAACCTCCCAGACCTATGCAAACATGCTGGAATGTCAAGATACGTCTCGAATACGACGTGATGTCTCTCATTAGCAGAGAGGATAAATCTCCTGTGACTTTGGAGCGCATAGTGTATGTAAATGGGGAATGGGTGACCAGTATCGGAGAGGGTGGTAGTTTTGGAGAATTGGCTCTGATATATGGAACTCCTCGAGCCGCTACTGTGAAAGCCAAGACTGACCTGAAACTGTGGGGCATAGACAGAGACAGCTACCGACGCATCCTTATGGGAAGCACGTTGAGGAAGAGGAAGATGTATGAAGAGTTCCTCAGTAAGGTGTCTATACTTGAATCCCTTGATAAGTGGGAGAGGTTGACCGTGGCCGATGCCCTGGAGCCTGTGCAGTTTGAAGATGGAGAGAAGATCGTAGTGCAGGGAGAACCGGGAGATGACTTCTTCATTATAACAGAGGCTGACCAGAGGAGAATGGCTCTCCTTTGTTTCTCCCAGGGTTGCTTTGGGAGTTTTGGCCTGACGCTTTCAAAAGAGAATGGCAGGGCAGAGAGACAGATAAAAATAAATGAAAAGGACTTTAGCATGAGACATGGGTCTGTCTCGCTGCTTGTTTGTCTCTCTCTTCCTCCGTCTCTGCCTGATTCCCAGCGCGGGGTGGCCAGCGGTTCAGTGATGGAATGTAGGCTGCAGACTTTCACACAGGGTCAGGCCCAGACTCTAGACTTGAGCGAGGGAACCAGGGACTGCTTTACTGACACAGGCTTGAGAAGGAAGAGCTGTGTGGGTGTCATTGTCCAGCTCTGGTTCCATAGTTCTTACTTTTCAGTGCTTGTTCGTTTTGACAGATACTATGAATGAAATATCATGCTTTTGTCATATTTTCTTTCACCTCTTCTATTTTTTGTGGTTTGGACCTCCGTTACACACACACACACGCACACACACATACACACACACACACACCCATGTCTAATTACACACTAAATAGGAGGATCACAGGACACATACTGACATAAAGCCACCTTAAACTGACATGTTTTTATTGATTTATCACATTATGGTTTGTTCTAAACCCTAGTGAGCTGCCTTGCTGTCTACTTCCTACACAGGCTACTCGCTTCTTAGGCATCTTTAGACAGTTTTATTGATACTTTTCTGTAATGATTGCATAATAATCATAATTGACAATTTTCGTGTGTTATCCACCATCTTGGATGGATTTTTTCTTTCTACTAGTGAGCTTGTTGCAATGCATTCTGGCATACATGCAGTGCACTTTAATGCTGTGTTAATCTGCATTTAAGTGCATAGTGGGTATTCTGTGTAATCTATGGCTAAAGCCAATAACAGAGCCAACACAATTTCAGTCCACTGAGGAAACTGCCTCACAAATTCTTTATTGTACATTCTGGCAATTTACACAAAACTTAAGAGAAATGTGGAAAAAA

Function

symbol description
prkar1b Predicted to enable cAMP binding activity; cAMP-dependent protein kinase inhibitor activity; and protein kinase A catalytic subunit binding activity. Predicted to be involved in negative regulation of cAMP-dependent protein kinase activity. Predicted to act upstream of or within regulation of protein phosphorylation. Predicted to be located in plasma membrane. Predicted to be part of cAMP-dependent protein kinase complex. Predicted to be active in cytoplasm. Orthologous to human PRKAR1B (protein kinase cAMP-dependent type I regulatory subunit beta).

GO:

id name namespace
GO:0030552 cAMP binding molecular_function

KEGG:

id description
K04739 PRKAR; cAMP-dependent protein kinase regulator

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01917876_01982420.mRNA False 2679 mRNA 0.47 17 1917286 1982420

Neighbor

gene id symbol gene type direction distance location
CI01000113_01908893_01913809 NA coding downstream 3058 1908739 ~ 1914228 (-)
CI01000113_01871256_01883265 PDGFAB coding downstream 32886 1870390 ~ 1884400 (-)
CI01000113_01854931_01857730 NA coding downstream 58411 1854766 ~ 1858875 (-)
CI01000113_01846674_01851715 BTBD17B coding downstream 65496 1846368 ~ 1851790 (-)
CI01000113_01652528_01653349 NA coding downstream 263840 1652386 ~ 1653446 (-)
CI01000113_02007178_02015572 NA coding upstream 24758 2007178 ~ 2015835 (-)
CI01000113_02127709_02131244 DHYS, DHPS coding upstream 144789 2127209 ~ 2131244 (-)
CI01000113_02136165_02143106 NA coding upstream 152904 2135324 ~ 2143106 (-)
CI01000113_02159290_02165087 SLC25A19 coding upstream 176290 2158710 ~ 2165087 (-)
CI01000113_02170894_02179511 AMDHD2 coding upstream 188341 2170761 ~ 2181419 (-)
G332751 NA non-coding downstream 83981 1832400 ~ 1833305 (-)
G332670 NA non-coding downstream 85437 1831421 ~ 1831849 (-)
G332731 NA non-coding downstream 92854 1770014 ~ 1824432 (-)
G332666 NA non-coding downstream 178590 1709639 ~ 1738696 (-)
G332706 NA non-coding downstream 186959 1706219 ~ 1730327 (-)
G332657 NA non-coding upstream 34922 2017342 ~ 2017775 (-)
G332645 NA non-coding upstream 60419 2042839 ~ 2045887 (-)
G332679 NA non-coding upstream 128270 2110690 ~ 2112552 (-)
G332663 NA non-coding upstream 130265 2112685 ~ 2113398 (-)
G332652 NA non-coding upstream 131104 2113524 ~ 2114332 (-)
G332160 NA other downstream 1470449 390227 ~ 446837 (-)
G332210 NA other downstream 1867801 47990 ~ 49485 (-)
G332649 NA other upstream 164794 2147214 ~ 2148558 (-)
G332837 NA other upstream 268425 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 385196 2356565 ~ 2370009 (-)
G332701 NA non-coding downstream 136017 1697214 ~ 1816436 (-)

Expression


Co-expression Network