CI01000113_01983091_01989335


Basic Information

Item Value
gene id CI01000113_01983091_01989335
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1983091 ~ 1989335 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000113_01983091_01989335.mRNA
ATGGCGACCGCCAGTGATGATCGTGCTGCAGCGGATGTTTTAAAATCTCTGGCTCGCCATTTAAACTGTTTAAACGAGGACAACAAAAGCGCGAGAAGACGAGCTCTAGAAGCGGTGAAGAGAGAAACGGTCGAGCAGCGTTTGTCCAGCGCTGCGCTGCAGGAGCTTTTCGCCGGTTTGCTGAAGGCGCTGCTAAAATGTCTGTCAGATCCTGCGGAGACATGCAGAGACACTGCTATTCAGATCATCACAGGGTTTATTAGATCTGTCCCCAAACCTGAAGACTCTCTGCCCTATCTCATGCCCACCCTGGCGCAGAGGCTCGGAGGGAAGGAGATCCTGGAGCCGGCGGAGGAGCTTAGACTGGCTCTGATGGAGATGCTCTCTCTGCTGGTGGAGGTGTGCGGCAGGCAACTGGCCCCCTACCTGGATGACATAATAAAGATCCTGCAGAGAACCATCACAGACCCCTTCCCTGAAGTCAAGAAAGAGAGCTGTAAATGCACCATCAGTTTTGCACAGTGTGTTCCTGATCATTTTCACCTGCAGGCCGAGAGTCTTCTGAAGCCTCTGTTGCTGACTATTTCTCACCAGCATTCCCAAGTGAGAGTTTCTGCCACACAGGCCACTGGCGCGGTCATTCGGCACAGTGCAGGCAAAAATGTAGATGACGTCTTATCCCACTTGGCTCAGAGATTGTTTGATGACTCGCCACGGGTGAGGAAGGCCGTTACCGTAGTTGTAGGTGATTGGCTTCTCCACCTGCCGGACAGATATTCCTACTTCCACAAGCTCATCCCACTGCTTCTGAGCAGTCTCAGTGATGAGATCCCTGAAATCAGGTGTCTTGCTGAGGACTTATGGAAACAAGTAGGATCTCAATGGGAGAAGGAAAATGAGGATGATCTGAAGGATAAGATGGACTTTCTGCTGCCTGCACCTGCCCTTTACACATCTGAAGGAGAGCGTCCCGGGCTGGGCTGCAGGGAGCTGGTGGTGAGGAATCTGTCTAAGCTGCTTCCTGCGTTGGGCCGGGACATTGGTGACTGGTTAGTGCAGACGCGAGTGAAGACGGCCCAGCTGCTGCGGGCTCTGCTGCTGCATGCTGAAGATCACTGTACACAACACCTGCAGTCCCTGCTCACGGTTCTGTACCATGCCTGTGCGGACCCTGAGCCTGACGTCAGAACACAGTGTTTGGAGTCAGCAAAGCTCTTGGGAGCATTTGTCAGTCCAGAGGTCTACCTCAAGTTGCTGTTACCTCACGTTGAGGACTCCACTTCCTGCTCGTCTTCTGCTCCCTGGACTCCTCTCATGGTTCTGGGGGCCATATTAAGAGGGAGTCCAAGGGAGGTGCTACGACCCCACCTGTTAAAAATTGGAAACATGCTTGCACAACCTGAAGTCTGTCAGGGGTCCCAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000113_01983091_01989335.mRNA True 1425 mRNA 0.53 6 1983091 1989335

Neighbor

gene id symbol gene type direction distance location
CI01000113_01834891_01839297 KCNJ2, KCNJ2A coding upstream 142965 1834891 ~ 1840126 (+)
CI01000113_01826332_01833431 NA coding upstream 149562 1825854 ~ 1833529 (+)
CI01000113_01761054_01815819 NA coding upstream 167094 1760927 ~ 1815997 (+)
CI01000113_01716646_01752755 NA coding upstream 229740 1715749 ~ 1753351 (+)
CI01000113_01698764_01709585 NA coding upstream 273383 1698624 ~ 1709708 (+)
CI01000113_01994682_02001599 DNAAF5 coding downstream 5347 1994682 ~ 2002028 (+)
CI01000113_02042831_02055567 NA coding downstream 50663 2039998 ~ 2056124 (+)
CI01000113_02059842_02092732 SLC9A3R2 coding downstream 70507 2059842 ~ 2093663 (+)
CI01000113_02111396_02122911 NA coding downstream 121300 2110635 ~ 2123037 (+)
CI01000113_02133051_02135286 NA coding downstream 143504 2132839 ~ 2136508 (+)
G331820 NA non-coding upstream 74021 1906419 ~ 1909070 (+)
G331840 NA non-coding upstream 126157 1855831 ~ 1856934 (+)
G331790 NA non-coding upstream 201401 1733674 ~ 1781690 (+)
G331793 NA non-coding upstream 226113 1755457 ~ 1756978 (+)
G331824 NA non-coding downstream 9109 1998444 ~ 2057885 (+)
G331833 NA non-coding downstream 41503 2030838 ~ 2034228 (+)
G331907 NA non-coding downstream 82200 2071535 ~ 2072337 (+)
G331914 NA non-coding downstream 116944 2106279 ~ 2106617 (+)
G331816 NA non-coding downstream 123348 2112683 ~ 2117151 (+)
G331759 NA other upstream 154188 1668002 ~ 1828903 (+)
G331767 NA other upstream 319836 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 557385 1424968 ~ 1425835 (+)
G331615 NA other upstream 736518 1246291 ~ 1246573 (+)
G331487 NA other upstream 1060958 917735 ~ 922133 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 354086 2342987 ~ 2346006 (+)
CI01000113_02548934_02576888 TBL3 other downstream 579432 2548934 ~ 2577790 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_038643 CABZ01085365.1 coding NW_003336996.1 KN150562.1 227 ~ 18843 (+)