CI01000113_02136165_02143106



Basic Information


Item Value
gene id CI01000113_02136165_02143106
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 2135324 ~ 2143106 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000113_02136165_02143106.mRNA
CTGATGTCGAGGCTAAACGTCACCCTGGAGGACGAGGAGAAGGAGAGATGCCCTGCTGCTGCCGCCACTGACACCCCACACTCCTTACCTCAGAGACTGGATTTGGAAGCATCTGTCTTCACTATGGAGACAAGCCCCTCTCCTTCTAGCAATGGAGCAAACCTCCTGTCATTGCCTTGGGAGATAGTTACCCAGATAGCCTCACATCTCCCAGCACAGTGTGTCATTAATGTGCTGCCACAGGTATGTCAGACGTTGGGAAAAGTTGCCGAGGATCGCGTGATGTGGCAGCTGAGGGCTCAAAATCTCTCAGGTCCCAGAGCACTATTCCCAGTCGGGCCAAAGGAGGATTTTGATTGGTCCAAGGCCTGCTTGGAAATGGAGCAGCTGATTGGCTGCTGGACAGGGCAGGAGAATCAAGTGAATAGAGAAGAAGCAGAGGGTGAGAGACAGGAAGAGGCGGCTGGCGGGGCGAACGGTGAAGTGCCGTTAGCTGAGGGGAACTTGGAAGAGATGCAGCTGGATGTTGATTTAAATGGTGCAGCGGAAGCAGGAGATGAAAATGTGCAAGTTCCATCCCAGAATGCCCCTGATAGTCCCCATCTGATTGAGCCGTCCTGCACTTCTTCACCCTTGGAGCACATCATCCTTCCGTCTGGCCACATTGCAGATGTGAATTGCGTCCTTCTGCTGGGAGGAACAGGGGCGTTGTGTGCCTCCGGCTCTAGGGACAGAAACGTGAACCTCTGGGACCTTCGAGAGGGCTCCAGAGGCGCGTTAACGCATACTCTAGGGGGGCGTGGTACCATTAGTACCCACCGGGGCTGGGTGTGGTGCCTGGCGTCGAGCGGACCTCTGCTGGCGTCAGGCTCGTTTGACAGCACCGTGAGGCTCTGGGATCTTGAAGCTGGAGGAGCAGAACGGGGACTCATTCAGTGCAAAGCTGCTGTTTTATGTCTGTCCTGCGAGAGGGACATGGTGCTGGCAGGAACACATGATCAGAAATTAAGCATCTTTGACACCCGCGTATCTGTACGAACCTTGCATGAGCCCATTGGAGCTGTAATTGTTGGCAACTGTCATTTATGTGATACAGCTGCAGATCCATTGGTGAAGAGTCTTCGCCTCCACGGTGATGCTGTGTTGTGCCTGGTGTCAGATGACCAGTACATTATATCAGGAAGTAAAGACCAAACCGTGGCTCTGTTCGACCGCAGGGCAGGGAAGCTCCTGCAGAAAGTTCAGCTGAGCTCCTACCTGTTGTCGGTGTGCTACAGCGGTCGCGAGGTCTGGGCCGGGGATAACCGCGGACTCGTGCACAGCTTCTCCATGCACAACAGCCGCCTGACGCCCATATCCCACTTTAACATCCACCGCTCACTGGTCACAGGTGTACACTCTTCTCCTGGTACTCTCTACACATGCTCCTCTGACCGCACTATCAAGTTAAGTGTTGAAGGAGGAACGCTGGCCATCGCTTCTGGTGACATGAATGTGGAGGTTTGGAGGCCCCGAATCTGAGAGTTTAAAAAGCATTTGAATCCAGGGAACAATAGGAACCAATCAGTTCTTTAACTCTGTATTTCTAGCAATCTACCAATGCATTATACATTCATGTGTTGCTTTTATTGGGGAAAAGATGAAAACGAATGTTTTAGGTGTCTGACACATGTTTGTAGAAACAAAAACTTGACATTCCCAGTTGTCCATGGATCTCCATGAAGCGTTCGCACTACGATAGCACACTAAACATTTCAGTGCCTCGTAACAGGAACACCACTACTGTTTTCTTTACAATTTACTTTATATTTGTTTCCAGTTTGCTTGTGTGATCATTACTTGAAATTTCAACAAAATTGATGTTAACAACGTACTTAGACATGCTGTGAATTCTGTAGCACATCTACAGTATAATACAGTGAAGTTATATGAGTACAAACAAGAATCATTATCAATCAGTTTTCAGTATTTAGCTCTCTAGATGTGTAATACACAAACTAGGAAATCGGTTATTAAAAACTGGTGTGATTCAGTTTGTTTTTGTATACTTGTCAGTGCACTTATACAAGTATACAGTTTAAAAATGAGGCACCATGCTTTAAAATGAATGCACTGTGAGGGAACACTTCAAGACCATAACAAATTACTAAATAGTCTAATTTAAAAATGTCAATATTTATGATTTATTTATAATTACTGCAGACGGTGCTGTGGTATTGCTCTGTGACTGACTGAATGTCCTGTGATCAAAATCTCTTTTTTTGTTTGATTGCTGATTGTTTTTGTTTTTTTTAAAGCTTTTTAAATGTACAATTTGATAGTTCAGTTGTATTTGTCAAGGTGTCATTTCAACACAAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000113_02136165_02143106.mRNA True 2362 mRNA 0.47 6 2135324 2143106

Neighbor


gene id symbol gene type direction distance location
CI01000113_02127709_02131244 DHYS, DHPS coding downstream 4080 2127209 ~ 2131244 (-)
CI01000113_02007178_02015572 NA coding downstream 119489 2007178 ~ 2015835 (-)
CI01000113_01917876_01982420 PRKAR1B coding downstream 152904 1917286 ~ 1982420 (-)
CI01000113_01908893_01913809 NA coding downstream 221096 1908739 ~ 1914228 (-)
CI01000113_01871256_01883265 PDGFAB coding downstream 250924 1870390 ~ 1884400 (-)
CI01000113_02159290_02165087 SLC25A19 coding upstream 15604 2158710 ~ 2165087 (-)
CI01000113_02170894_02179511 AMDHD2 coding upstream 27655 2170761 ~ 2181419 (-)
CI01000113_02193825_02200601 TUBB4A, TUFM coding upstream 50249 2193355 ~ 2201275 (-)
CI01000113_02334123_02335356 NA coding upstream 190405 2333511 ~ 2335356 (-)
CI01000113_02348726_02354574 GCDHB, GCDH.L, GCDHA, GCDH coding upstream 205500 2348606 ~ 2354574 (-)
G332638 NA non-coding downstream 16178 2118370 ~ 2119146 (-)
G332650 NA non-coding downstream 17074 2117936 ~ 2118250 (-)
G332661 NA non-coding downstream 17536 2116966 ~ 2117788 (-)
G332652 NA non-coding downstream 20992 2113524 ~ 2114332 (-)
G332663 NA non-coding downstream 21926 2112685 ~ 2113398 (-)
G332820 NA non-coding upstream 1798 2144904 ~ 2145741 (-)
G332821 NA non-coding upstream 3096 2146202 ~ 2146500 (-)
G332656 NA non-coding upstream 13411 2156517 ~ 2158361 (-)
G332866 NA non-coding upstream 146542 2289648 ~ 2290022 (-)
G332871 NA non-coding upstream 155363 2298469 ~ 2298893 (-)
G332160 NA other downstream 1688487 390227 ~ 446837 (-)
G332210 NA other downstream 2085839 47990 ~ 49485 (-)
G332649 NA other upstream 4108 2147214 ~ 2148558 (-)
G332837 NA other upstream 107739 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 224510 2356565 ~ 2370009 (-)

Expression



Co-expression Network