G332283


Basic Information

Item Value
gene id G332283
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 237050 ~ 239053 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377753
AAAAAAAAAAAACCCTGAAAATGTACCAACTACCTTAAGTATGAAGAGCAGAGATAATGAATATTTGATTGCCAACAAATTTACCAAGCTACAATTCGAACAGCAGCTACAAATTAAAAATGAAAGAAGACCCCATGCTTAAGTTCAGTTTGTAGGCTACAGCAAAATGCTTCACTAAACAGTATTTAAAGGGACAGAAGGATGGATTTTTGCTTCAAGTGATAGGCTAGGTCTTGCTGCTTATGTGTTATTTCATTAAAAGTGACCAAAAAGGCAGTTAAGCTAAAAAAAATTTGTGTGCCTCCTCTATTTTAAAACCCACCATCTGCCACTCATTTAAATAATGTATTAGTAAATGTTGAAATTAAAATAAACAAGGATTAATAACTGTTTTAGAAGTATTTGTCATTGTTAGTTCATGTTAACTAATGAAACATGAACTAACAACTGTTAAACTAATGTTATCTAATGGAACCTTATTGTAGTGTTACCAAAAAAGTAAAAATCTTTTTAAAATCTTGTTTAAAACACGTGCCAAGTTCTTAGAAATGTATTTTTTGTATTCGTGTTGGTTTCATTTGGTTTTAAAAACTTCTATACCATCAAGTAAAAAGAAATAACATTTCCAGCTGAAAAATAACATTTCCACCTTCCAAGTAAGTTAAAAGTTTTAAAATATATTTTAAATTATTAATTCATAAATATCATTAGGTTTTGGGGGGTTGTAAAAAAAGGAGCGCCTAGAGAAGCAGTCAGTATCTTTTCGTCTTCAGGGACTGTTCTGTCTGATCGCGATTCTTCGAATCTGGTAAGAATATTTAAATCATGTCTAACAAACACTTCAGGAAGTGTGTGGATCCGTGTCCCAGGTTTCTGACACCTGATGACACACACAATCTGTGCGTTATCTGTCTGGGAGAGGAGCACGCACGGACAGTGCTTGAGACAACGGCCCCCTGGCTACATTCCCTTAGAGGTACCCTCTTTTCTCTGAAAAGAAGTTTGGTCCCAGAAGCCTTTGAGCGGCCTTGGTAGGCCTTCTGTGGAAGGCCTCTTTGAGGCTTATAGCTTGGGCTGTTGGCCATAGGGAATGCTGTCACTGACAGCCTATGTGTGACCCGTAGGGGGAGTGGTTCTGGCATTTCAGTTGAAATTGCTAGTTCTGACGTTTGTCTAGCCATCTTGGCATGCACTCCCCTCAGCATGGTGGCGTGGGTATATCGTTCCCCATAGCGCATTCAAACGCAGTGTTGAGTTCCCTTTCGAAAGGGAACGTCTCAGGTTACGTATGTAACCATGGTTCCCTTAGAACACGGAACGAGACACTGCGTTACATGCCATGCATCAGGGCTGCCTGCTGAACAGTCCCTTCAGACGACAAGGTACTGACTGCTTCTCTAGGCGCTCCTTTATACATCCGGGTCGCGTCTATGATGGCATCATAGGCTGTCGCCGGCCAATAGGATTAGTGAGATTTGATATTGCTTATAGACACCGGTTCACATGATGACGTTCCCCATAGCGTATTCAAACGCAGTGTCTCGTTCCCTCTTCTCAGGGAACCATGGTTACATACGTAACCTGAGACGTTATTCAAGTGTTGATAAAAAAAAGAATGCATGAAGCTAGAATAAAAAAGTGTTTTGTTTGTTTGATTAAAAGCAGAGGCTCAGTTATTTCTTTTGATATATTGTATGTTCAGATATTCATACAGCAAAATATTCTGGGGGCCATGAAAGTTTTGTGAAAATGCTGGTGCTGGATGGCAACTTAATATATATAATAATATATAATTTTATTAAAACTGCTTCATTGTTTATTTCTTCAAAGAAATAATAATAATAGATTATGCTTGATAGCATACCACACTTAAAGGGATAGTTCATCCCTTTAAATTCATAGTTCTTTCATTATTATATAATTTTTTTGCCAATTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377753 True 1939 lncRNA 0.38 2 237050 239053

Neighbor

gene id symbol gene type direction distance location
CI01000113_00122344_00130639 ELAVL3 coding downstream 106343 121854 ~ 130707 (-)
CI01000113_00077172_00080517 NA coding downstream 156533 75223 ~ 80517 (-)
CI01000113_00254945_00255661 HBAA1 coding upstream 15805 254858 ~ 255709 (-)
CI01000113_00268929_00271262 NA coding upstream 29795 268848 ~ 271294 (-)
CI01000113_00283931_00284691 NA coding upstream 44809 283862 ~ 284723 (-)
CI01000113_00301490_00302258 NA coding upstream 62355 301408 ~ 302281 (-)
CI01000113_00308045_00308457 HBBE2, HBBE1.1 coding upstream 68851 307904 ~ 308514 (-)
G332264 NA non-coding downstream 26192 209581 ~ 210858 (-)
G332231 NA non-coding downstream 153207 83542 ~ 83843 (-)
G332230 NA non-coding downstream 153589 82937 ~ 83461 (-)
G332229 NA non-coding downstream 154934 81900 ~ 82116 (-)
G332227 NA non-coding downstream 158201 78459 ~ 78849 (-)
G332173 NA non-coding upstream 1337 240390 ~ 294222 (-)
G332284 NA non-coding upstream 3528 242581 ~ 295514 (-)
G332152 NA non-coding upstream 17771 256824 ~ 327004 (-)
G332158 NA non-coding upstream 38310 277363 ~ 334616 (-)
G332312 NA non-coding upstream 134964 374017 ~ 374294 (-)
G332210 NA other downstream 187565 47990 ~ 49485 (-)
G332160 NA other upstream 151174 390227 ~ 446837 (-)
G332649 NA other upstream 1908161 2147214 ~ 2148558 (-)
G332837 NA other upstream 2011792 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 2128563 2356565 ~ 2370009 (-)

Expression


Co-expression Network