G332344



Basic Information


Item Value
gene id G332344
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 447950 ~ 448335 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU377826
AAAAAAAAAAAAAAAAAAAAAACAACAACAAAAAAGTAGTTCTGAGAAATTTTAAACTAAGAAATAGGCACACTGTGAGATTTAAAGATGCAAATGTGATGAGATATCTTATGAGTAATAAAGGCACATCATTATATATAAACTACACTGTTGACGTAGCAAACACAGTGCAGCGCTTCCGGATTCTACGTCAGAACGCTGACTCATTATTGGCTGACGCTGTTCACATGACGCATACATGTAATGCTGACATAGGAGCCGGCCAATACCGAGCCACCGTTCTGACATAGAACCCGGAAGCTGACAAGGAAGAGAAGTAAATAAAGTCATTATTTTTGTTTGTTTTTTTCACACAATAAGTATTCTTGTCGCTTCATAACATTAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU377826 True 386 lncRNA 0.36 1 447950 448335

Neighbor


gene id symbol gene type direction distance location
CI01000113_00355640_00360687 MPG coding downstream 87130 355276 ~ 360820 (-)
CI01000113_00332256_00333023 NA coding downstream 114895 332171 ~ 333055 (-)
CI01000113_00324040_00324756 HBAA1 coding downstream 123146 323951 ~ 324804 (-)
CI01000113_00308045_00308457 HBBE2, HBBE1.1 coding downstream 139436 307904 ~ 308514 (-)
CI01000113_00301490_00302258 NA coding downstream 145669 301408 ~ 302281 (-)
CI01000113_00449242_00453843 AANAT2, AANAT-2 coding upstream 589 448924 ~ 453843 (-)
CI01000113_00461761_00471457 MGRN1, MGRN1B coding upstream 13426 461761 ~ 471457 (-)
CI01000113_00473025_00476254 NA coding upstream 23797 472132 ~ 478063 (-)
CI01000113_00489480_00490623 NA coding upstream 41145 489480 ~ 490736 (-)
CI01000113_00496299_00500634 NA coding upstream 47760 496095 ~ 501017 (-)
G332313 NA non-coding downstream 73258 374486 ~ 374692 (-)
G332312 NA non-coding downstream 73656 374017 ~ 374294 (-)
G332158 NA non-coding downstream 113334 277363 ~ 334616 (-)
G332152 NA non-coding downstream 120946 256824 ~ 327004 (-)
G332284 NA non-coding downstream 152436 242581 ~ 295514 (-)
G332346 NA non-coding upstream 3813 452148 ~ 452348 (-)
G332347 NA non-coding upstream 4420 452755 ~ 453096 (-)
G332349 NA non-coding upstream 32578 480913 ~ 481182 (-)
G332170 NA non-coding upstream 125505 573840 ~ 580135 (-)
G332356 NA non-coding upstream 141678 590013 ~ 590327 (-)
G332160 NA other downstream 1113 390227 ~ 446837 (-)
G332210 NA other downstream 398465 47990 ~ 49485 (-)
G332649 NA other upstream 1698879 2147214 ~ 2148558 (-)
G332837 NA other upstream 1802510 2250845 ~ 2251213 (-)
CI01000113_02356565_02370009 NA other upstream 1919281 2356565 ~ 2370009 (-)

Expression



Co-expression Network