G331506


Basic Information

Item Value
gene id G331506
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 931090 ~ 932374 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU376820
CTTTGCCCCTTGAACACCATCGACGCCTTGAATTCCCTGCTGCCCAGGTGGACCAGGTGGCCCTCTTGGCCCCACAAGTCCTCTTAGCCCAGGTTCTCCCGGTTGCCCTCTTGGTCCAACAGGCCCATCCGAACCCTGTAATAGGAAATATCAATCAACATCAAGTTAGGAAATATAATCATCTTCATTGTGGTAGACAAAATTATGTGAGATCCAGCCTTAAGTCTTTGAGGAAGGATGTCAGAAGGGTTATGTATGCAAAAATATTCCCATTCTTGAAAGCTGTGATCAATGTGAATCGCTGCTGCATACATTTTTCAACTTTGCATAATGAGAACATCCCACACAGTGCACAGCTTGTCTCTTTCATGCGATTTGTGAGTACACACCTGAGGCAGTGCAGGCGATCTTTAAACGGATTATTAGCAATCTGATAAAAGCCTCATTTAGGGAATTGCACAAAGCTCCGAAAAACACGATAGAAGAAAAGAAGAATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376820 True 498 lncRNA 0.44 3 931090 932374

Neighbor

gene id symbol gene type direction distance location
CI01000113_00659612_00684227 TRIP10, TRIP10A coding upstream 246060 659612 ~ 685030 (+)
CI01000113_00645261_00649236 NA coding upstream 281275 645261 ~ 649815 (+)
CI01000113_00629848_00638123 ANGPTL6 coding upstream 292658 628843 ~ 638432 (+)
CI01000113_00574016_00587822 DNMT1 coding upstream 343008 573455 ~ 588082 (+)
CI01000113_00568754_00569821 S1PR2 coding upstream 360574 568410 ~ 570516 (+)
CI01000113_00997825_01005290 RDH8A, RDH8 coding downstream 64489 996863 ~ 1005399 (+)
CI01000113_01072283_01091398 NOTCH3 coding downstream 139531 1071905 ~ 1091730 (+)
CI01000113_01110162_01112498 NA coding downstream 177788 1110162 ~ 1112502 (+)
CI01000113_01120464_01124821 NA coding downstream 188024 1120398 ~ 1125031 (+)
CI01000113_01127641_01134250 NA coding downstream 195267 1127641 ~ 1134481 (+)
G331491 NA non-coding upstream 2303 925654 ~ 928787 (+)
G331473 NA non-coding upstream 43222 887668 ~ 887868 (+)
G331456 NA non-coding upstream 61341 869338 ~ 869749 (+)
G331413 NA non-coding upstream 154905 770294 ~ 776185 (+)
G331406 NA non-coding upstream 205400 725459 ~ 725690 (+)
G331504 NA non-coding downstream 8152 940526 ~ 942201 (+)
G331510 NA non-coding downstream 21617 953991 ~ 973533 (+)
G331528 NA non-coding downstream 44935 977309 ~ 977746 (+)
G331529 NA non-coding downstream 46950 979324 ~ 979718 (+)
G331530 NA non-coding downstream 53709 986083 ~ 986441 (+)
G331487 NA other upstream 8957 917735 ~ 922133 (+)
G331470 NA other upstream 14553 913392 ~ 916537 (+)
G331260 NA other upstream 596469 334158 ~ 334621 (+)
G331615 NA other downstream 313917 1246291 ~ 1246573 (+)
CI01000113_01424978_01425704 NA other downstream 492187 1424968 ~ 1425835 (+)
G331767 NA other downstream 730411 1662785 ~ 1663255 (+)
G331759 NA other downstream 735628 1668002 ~ 1828903 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 1411047 2342987 ~ 2346006 (+)

Expression


Co-expression Network