G331644


Basic Information

Item Value
gene id G331644
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1196784 ~ 1197024 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU376990
TCATCATACTGTAATCCCTCCTTATCTGACACTGGGCAAAATGAGGCCGATCTGGGGGGAGGCCTGCCGGGTATGTCTGATTCATAGACAGTCAGAGTGGGAGAGGAAGGACTGGAACAAACTTTCTTTGGTGGAGCAGGTGATGCCGGGGTCAGCATGATTTGAGGGGCTGCTTTATTCTTCTCTCTCGGCTGGAGGCCTGGCAATGTGTTAAGTGTCACGCGTTGATCATCCAGGTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU376990 True 241 lncRNA 0.52 1 1196784 1197024

Neighbor

gene id symbol gene type direction distance location
CI01000113_01127641_01134250 NA coding upstream 62303 1127641 ~ 1134481 (+)
CI01000113_01120464_01124821 NA coding upstream 71753 1120398 ~ 1125031 (+)
CI01000113_01110162_01112498 NA coding upstream 84282 1110162 ~ 1112502 (+)
CI01000113_01072283_01091398 NOTCH3 coding upstream 105054 1071905 ~ 1091730 (+)
CI01000113_00997825_01005290 RDH8A, RDH8 coding upstream 191385 996863 ~ 1005399 (+)
CI01000113_01292096_01298082 NA coding downstream 94929 1291953 ~ 1299919 (+)
CI01000113_01321501_01326215 NA coding downstream 124332 1321356 ~ 1326350 (+)
CI01000113_01329811_01334714 LPAR2A coding downstream 131859 1328883 ~ 1334735 (+)
CI01000113_01376249_01385209 NA coding downstream 177043 1374067 ~ 1385402 (+)
CI01000113_01424978_01425704 NA coding downstream 227954 1424968 ~ 1425835 (+)
G331495 NA non-coding upstream 78245 1117811 ~ 1118539 (+)
G331496 NA non-coding upstream 126813 1063948 ~ 1069971 (+)
G331530 NA non-coding upstream 210343 986083 ~ 986441 (+)
G331529 NA non-coding upstream 217066 979324 ~ 979718 (+)
G331528 NA non-coding upstream 219038 977309 ~ 977746 (+)
G331645 NA non-coding downstream 1372 1198396 ~ 1198598 (+)
G331646 NA non-coding downstream 2372 1199396 ~ 1199629 (+)
G331647 NA non-coding downstream 5065 1202089 ~ 1202303 (+)
G331651 NA non-coding downstream 8563 1205587 ~ 1205877 (+)
G331652 NA non-coding downstream 8955 1205979 ~ 1206262 (+)
G331487 NA other upstream 274651 917735 ~ 922133 (+)
G331470 NA other upstream 280247 913392 ~ 916537 (+)
G331260 NA other upstream 862163 334158 ~ 334621 (+)
G331615 NA other downstream 49267 1246291 ~ 1246573 (+)
G331767 NA other downstream 465761 1662785 ~ 1663255 (+)
G331759 NA other downstream 470978 1668002 ~ 1828903 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 1146397 2342987 ~ 2346006 (+)

Expression


Co-expression Network