Gene
RNA
| Item | Value |
|---|---|
| gene id | G332587 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000113 |
| NCBI id | null |
| chromosome length | 2886875 |
| location | 1407820 ~ 1408432 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU378108 | True | 475 | lncRNA | 0.32 | 2 | 1407820 | 1408432 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000113_01396970_01402406 | NA | coding | downstream | 5414 | 1396431 ~ 1402406 (-) |
| CI01000113_01351820_01359750 | PBX3, PBX1 | coding | downstream | 46162 | 1351412 ~ 1361658 (-) |
| CI01000113_01259501_01275141 | BRD4, BRD2, BRD3 | coding | downstream | 132679 | 1259138 ~ 1275141 (-) |
| CI01000113_01252186_01255334 | NA | coding | downstream | 152486 | 1252186 ~ 1255410 (-) |
| CI01000113_01208541_01221483 | STXBP2 | coding | downstream | 185737 | 1207889 ~ 1222083 (-) |
| CI01000113_01432095_01456239 | LMX1AL | coding | upstream | 23554 | 1431986 ~ 1456239 (-) |
| CI01000113_01458405_01476967 | GMIP | coding | upstream | 49973 | 1458405 ~ 1476967 (-) |
| CI01000113_01480199_01500090 | COLGALT1 | coding | upstream | 71045 | 1479477 ~ 1500271 (-) |
| CI01000113_01502427_01506373 | NA | coding | upstream | 93729 | 1502161 ~ 1506373 (-) |
| CI01000113_01554726_01565897 | SLC27A1A, SLC27A1 | coding | upstream | 145712 | 1554144 ~ 1565897 (-) |
| G332523 | NA | non-coding | downstream | 161247 | 1246293 ~ 1246573 (-) |
| G332574 | NA | non-coding | downstream | 167864 | 1239671 ~ 1239956 (-) |
| G332524 | NA | non-coding | downstream | 289273 | 1117811 ~ 1118547 (-) |
| G332458 | NA | non-coding | downstream | 430297 | 977300 ~ 977523 (-) |
| G332596 | NA | non-coding | upstream | 134802 | 1543234 ~ 1543454 (-) |
| G332597 | NA | non-coding | upstream | 135758 | 1544190 ~ 1544419 (-) |
| G332598 | NA | non-coding | upstream | 136934 | 1545366 ~ 1545584 (-) |
| G332599 | NA | non-coding | upstream | 137571 | 1546003 ~ 1546223 (-) |
| G332600 | NA | non-coding | upstream | 137985 | 1546417 ~ 1546764 (-) |
| G332160 | NA | other | downstream | 960983 | 390227 ~ 446837 (-) |
| G332210 | NA | other | downstream | 1358335 | 47990 ~ 49485 (-) |
| G332649 | NA | other | upstream | 738782 | 2147214 ~ 2148558 (-) |
| G332837 | NA | other | upstream | 842413 | 2250845 ~ 2251213 (-) |
| CI01000113_02356565_02370009 | NA | other | upstream | 959184 | 2356565 ~ 2370009 (-) |
