Gene
RNA
| Item | Value |
|---|---|
| gene id | G332596 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000113 |
| NCBI id | null |
| chromosome length | 2886875 |
| location | 1543234 ~ 1543454 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU378118 | True | 221 | lncRNA | 0.45 | 1 | 1543234 | 1543454 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000113_01502427_01506373 | NA | coding | downstream | 36861 | 1502161 ~ 1506373 (-) |
| CI01000113_01480199_01500090 | COLGALT1 | coding | downstream | 42963 | 1479477 ~ 1500271 (-) |
| CI01000113_01458405_01476967 | GMIP | coding | downstream | 66267 | 1458405 ~ 1476967 (-) |
| CI01000113_01432095_01456239 | LMX1AL | coding | downstream | 86995 | 1431986 ~ 1456239 (-) |
| CI01000113_01404787_01423732 | ATP13A1 | coding | downstream | 119502 | 1404666 ~ 1423732 (-) |
| CI01000113_01554726_01565897 | SLC27A1A, SLC27A1 | coding | upstream | 10690 | 1554144 ~ 1565897 (-) |
| CI01000113_01569971_01571224 | PTGER1C | coding | upstream | 25884 | 1569308 ~ 1571802 (-) |
| CI01000113_01589305_01600983 | NA | coding | upstream | 45700 | 1589154 ~ 1601012 (-) |
| CI01000113_01652528_01653349 | NA | coding | upstream | 108932 | 1652386 ~ 1653446 (-) |
| CI01000113_01846674_01851715 | BTBD17B | coding | upstream | 302914 | 1846368 ~ 1851790 (-) |
| G332587 | NA | non-coding | downstream | 134802 | 1407820 ~ 1408432 (-) |
| CI01000113_01252186_01255334 | NA | non-coding | downstream | 287824 | 1252186 ~ 1255410 (-) |
| G332523 | NA | non-coding | downstream | 296661 | 1246293 ~ 1246573 (-) |
| G332574 | NA | non-coding | downstream | 303278 | 1239671 ~ 1239956 (-) |
| G332524 | NA | non-coding | downstream | 424687 | 1117811 ~ 1118547 (-) |
| G332597 | NA | non-coding | upstream | 736 | 1544190 ~ 1544419 (-) |
| G332598 | NA | non-coding | upstream | 1912 | 1545366 ~ 1545584 (-) |
| G332599 | NA | non-coding | upstream | 2549 | 1546003 ~ 1546223 (-) |
| G332600 | NA | non-coding | upstream | 2963 | 1546417 ~ 1546764 (-) |
| G332601 | NA | non-coding | upstream | 3674 | 1547128 ~ 1547535 (-) |
| G332160 | NA | other | downstream | 1096397 | 390227 ~ 446837 (-) |
| G332210 | NA | other | downstream | 1493749 | 47990 ~ 49485 (-) |
| G332649 | NA | other | upstream | 603760 | 2147214 ~ 2148558 (-) |
| G332837 | NA | other | upstream | 707391 | 2250845 ~ 2251213 (-) |
| CI01000113_02356565_02370009 | NA | other | upstream | 824162 | 2356565 ~ 2370009 (-) |
