G331759


Basic Information

Item Value
gene id G331759
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1668002 ~ 1828903 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377129
AGTATGGAGCTCAGTCAACTTCCTCTTGTGCTCTTGCTGATTTCAAACATCCACTCTGGACACACTGAAGAAAGACTAAAACCCAAAGTGACCATTAAACCTGATCAACATGTATTCAGAGGAGACTCAGTCACTCTCAGATGTGACATTGATCCTGAAGGAGTCACTAGCTGGAGGTACTACTGGTATAAAGGAGGTTCATTCAGATTTACCAGTGAACTACAGGAACACACATTCAGTTCTGTTTCTGAGTCTGACGCTGGTAAATACTCCTGTTATGGAACAGAGATTGAAGGATTACGACGCAGATCACAACTCAGTGATGAAGTTACACTGACAGTATCAGATTTTCCCAAACCAACTCTGACTGTTGCGCCACAGAGTTCAGTGTTCACTGGAGACTCAGTTACTCTCAGATGTAAGGTGGATCCGTCACGGGATGGATGGGAGTTTCTCTGGAGTAAAAACTCAAACCCTGAATCTACTGAAGCTGCAACTAAAACAATCAGTCCTGTGAAAGTCTCTGATGGAGGAGAGAACAGGTGCAGAGCACGAAGACGAGGATATTA
>TU377145
AGTATGGAGCTCAGTCAACTTCCTCTTGTGCTCTTGCTGATTTCAAACATCCACTCTGGACACACTGAAGAAAGACTAAAACCCAAAGTGACCATTAAACCTGATCAACATGTATTCAGAGGAGACTCAGTCACTCTCAGATGTGACATTGATCCTGAAGGAGTCACTAGCTGGAGGTACTACTGGTATAAAGGAGGTTCATTCAGATTTACCAGTGAACTACAGGAACACACATTCAGTTCTGTTTCTGAGTCTGACGCTGGTAAATACTCCTGTTATGGAACAGAGATTGAAGGATTACGACGCAGATCACAACTCAGTGATGAAGTTACACTGACAGTATCAGATTTTCCCAAACCAGCTCTGACTGTTGCGCCACAGAGTTCAGTGTTCACTGGAGACTCAGTCACTCTCAGATGTAAGGTGGATCCATCATGGGATGGATGGGAGTTTCTCTGGAGTAAAAACTCAAACCCTGAATCTACTGAAGCTGCAACTAAAACAATCAGTCCTGTGAAAGTCTCTGATGGAGGAGAGTACAGGTGCAGAGCACAAAGACGAGGATATTACACAGATTACAGTGAACCAACAGCAGTGACAATATATGAAAGACCAAAACCCGAAGTGACCATTAAACCTGATCAACATGTATTCAGAGGAGACTCAGTCACTCTCAGATGTGACATTGATGCTGAAGGAGTCACTAGCTGGAGNNNN
>TU377135
TCGAGCTCTAGATTATTAACACAAAGATTGTGGGTTTGAACCTGTATTGTCTTTTATGTTGTTGCATTGTCTATAATGTTGGCCTTTTTGACCCTGTAATGTTTCTTACATGGTCTAATAAATCAAAAAATACATTGATAATTTACCAGTGAGAGAATGAGATCATCTGTTGAAAATGTTTCAGAACTCATGCTCCCAAATTCCCAATAATTTTATATTGACAGATTTTCCCAAACCAACTCTGACTGTTGAGCCACAGAGTTCAGTGTTCACTGGAGACTCAGTTACTCTGAGATGTAAGGTGGATCCGCCACGGGATGGATGGGAGTTTCTCTGGAGTAAAAACTCAAACTCTGAATCTACTGAAGCTGCAACCAAAACAATCAATCGTGTGAAAGTCTCTGATGGAGGAGAGTACAGGTGCAGAGCACAAAGACAAGGATATTACACAGATTACAGTGAACCAGTAACAGTGACAATATATGAAAGACCAAAAGCCAAAGTGTCCATTAAACCTGATCAACATGTATTCAGAGGAGACTCAGTCACTCTCAGATGTGACATTGATGCTGAAGNNNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377129 True 34 TUCP 0.44 1 1668002 1668035
TU377145 True 144 TUCP 0.43 2 1668002 1782301
TU377135 True 95 TUCP 0.38 1 1828809 1828903

Neighbor

gene id symbol gene type direction distance location
CI01000113_01547153_01553082 NA coding upstream 114216 1546736 ~ 1553786 (+)
CI01000113_01530888_01533572 NA coding upstream 134430 1530791 ~ 1533572 (+)
CI01000113_01515238_01529826 NA coding upstream 138051 1515171 ~ 1529951 (+)
CI01000113_01510550_01513751 NA coding upstream 153796 1510550 ~ 1514206 (+)
CI01000113_01507537_01509522 NA coding upstream 158480 1507537 ~ 1509522 (+)
CI01000113_01834891_01839297 KCNJ2, KCNJ2A coding downstream 5988 1834891 ~ 1840126 (+)
CI01000113_01983091_01989335 NA coding downstream 154188 1983091 ~ 1989335 (+)
CI01000113_01994682_02001599 DNAAF5 coding downstream 165779 1994682 ~ 2002028 (+)
CI01000113_02042831_02055567 NA coding downstream 211095 2039998 ~ 2056124 (+)
CI01000113_02059842_02092732 SLC9A3R2 coding downstream 230939 2059842 ~ 2093663 (+)
G331756 NA non-coding upstream 29569 1638118 ~ 1638433 (+)
G331755 NA non-coding upstream 31342 1636151 ~ 1636660 (+)
G331747 NA non-coding upstream 58576 1609221 ~ 1609426 (+)
G331746 NA non-coding upstream 66394 1601376 ~ 1601608 (+)
G331744 NA non-coding upstream 81638 1585698 ~ 1586364 (+)
G331840 NA non-coding downstream 26928 1855831 ~ 1856934 (+)
G331820 NA non-coding downstream 77516 1906419 ~ 1909070 (+)
G331824 NA non-coding downstream 169541 1998444 ~ 2057885 (+)
G331833 NA non-coding downstream 201935 2030838 ~ 2034228 (+)
G331907 NA non-coding downstream 242632 2071535 ~ 2072337 (+)
G331767 NA other upstream 4747 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 242296 1424968 ~ 1425835 (+)
G331615 NA other upstream 421429 1246291 ~ 1246573 (+)
G331487 NA other upstream 745869 917735 ~ 922133 (+)
G331470 NA other upstream 751465 913392 ~ 916537 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 514518 2342987 ~ 2346006 (+)
CI01000113_02548934_02576888 TBL3 other downstream 739864 2548934 ~ 2577790 (+)

Expression


Co-expression Network