Gene
RNA
| Item | Value |
|---|---|
| gene id | G332701 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000113 |
| NCBI id | null |
| chromosome length | 2886875 |
| location | 1697214 ~ 1816436 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU378229 | False | 237 | lncRNA | 0.39 | 2 | 1697214 | 1804112 |
| TU378230 | True | 364 | lncRNA | 0.38 | 3 | 1697214 | 1816436 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000113_01652528_01653349 | NA | coding | downstream | 43768 | 1652386 ~ 1653446 (-) |
| CI01000113_01589305_01600983 | NA | coding | downstream | 96202 | 1589154 ~ 1601012 (-) |
| CI01000113_01569971_01571224 | PTGER1C | coding | downstream | 125412 | 1569308 ~ 1571802 (-) |
| CI01000113_01554726_01565897 | SLC27A1A, SLC27A1 | coding | downstream | 131317 | 1554144 ~ 1565897 (-) |
| CI01000113_01502427_01506373 | NA | coding | downstream | 190841 | 1502161 ~ 1506373 (-) |
| CI01000113_01846674_01851715 | BTBD17B | coding | upstream | 29932 | 1846368 ~ 1851790 (-) |
| CI01000113_01854931_01857730 | NA | coding | upstream | 38330 | 1854766 ~ 1858875 (-) |
| CI01000113_01871256_01883265 | PDGFAB | coding | upstream | 53954 | 1870390 ~ 1884400 (-) |
| CI01000113_01908893_01913809 | NA | coding | upstream | 92303 | 1908739 ~ 1914228 (-) |
| CI01000113_01917876_01982420 | PRKAR1B | coding | upstream | 100850 | 1917286 ~ 1982420 (-) |
| G332624 | NA | non-coding | downstream | 33958 | 1663025 ~ 1663256 (-) |
| G332623 | NA | non-coding | downstream | 34230 | 1662756 ~ 1662984 (-) |
| G332622 | NA | non-coding | downstream | 38276 | 1658725 ~ 1658938 (-) |
| G332621 | NA | non-coding | downstream | 51864 | 1645000 ~ 1645350 (-) |
| G332611 | NA | non-coding | downstream | 110939 | 1586026 ~ 1586275 (-) |
| G332670 | NA | non-coding | upstream | 14985 | 1831421 ~ 1831849 (-) |
| G332751 | NA | non-coding | upstream | 15964 | 1832400 ~ 1833305 (-) |
| G332657 | NA | non-coding | upstream | 200906 | 2017342 ~ 2017775 (-) |
| G332645 | NA | non-coding | upstream | 226403 | 2042839 ~ 2045887 (-) |
| G332160 | NA | other | downstream | 1250377 | 390227 ~ 446837 (-) |
| G332210 | NA | other | downstream | 1647729 | 47990 ~ 49485 (-) |
| G332649 | NA | other | upstream | 330778 | 2147214 ~ 2148558 (-) |
| G332837 | NA | other | upstream | 434409 | 2250845 ~ 2251213 (-) |
| CI01000113_02356565_02370009 | NA | other | upstream | 551180 | 2356565 ~ 2370009 (-) |
