G331824


Basic Information

Item Value
gene id G331824
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 1998444 ~ 2057885 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377228
AATTCTGACTTCTTTTCTCACAGTTGCGAGTTATAAAGTCAGAATTGCAAGATAAATTTGCAATTGCACGAAATATAGTTTATATCTCGCAATTGACTTTTTTCTCGCAATTCGGACTTTTTTCTCAGTCACAATTACGCAAAATATAGCGTATATCTCGCAATTGACTTTTTCTCGCAATTCTGACTTTTTCTCACAATTGCAAGTTATGAAGTCAGAATTGCGAGATATTGACTTTTCTCAGAATTGTGAGATATAAACTCATAATTATGAGTTATAAATTCTAATTCTGAGGAAAAAAAGACTCACAATTGCCTTATTTTTTATTCAGTGGCAGAAACAAACTTCCATAGATAACAGCCATAAATTGTAGGAGACACTAGCTTGAGCTCAGATGGAATATCTCCACAGAAGGGAACGGATGTTTATGTGAGCATGTGGACTGATACGTGTACATTTTAACAAAACTGGAAATGAAACACTCACTGTTTGTTTCTCTCGTCAGTAGTAATATCTCTAATATCACAGTCATGACACTCTGCAGGAATGTAACTTATTGTAATTAGTCCTTTTTAATCGACTTATATCAGTGTTTATTTTGCATAAAGGGGTGCGCCCTGTTGTCGTCATCATCATTATTTTCCTTTTTATTGTTTTTTTTTTTTTGTTAAGCATTTGAGTTAAAGTAGACAATGCACTGTCTTTATAAAGGAAATGTAAGTCGCACAAGTCCTATGTGATTCGTTGGATATGTTTAAAAAGTCAGGGGTTCATTTATAGAACTGTGTCATCAACGATGACCTAAAAGAGTCTGTTTGTAAAATACTATTGATTTGTTCGTAACTATTTATTTTACAGAAGTTTAGCTGAGAAATAGGACTTTGTGCGGTGTGTTTTGTAAAATGCTTTTCAGTGCAAATTGGTCCGTTTATATTTAGTTTTGTTTTTGTTTTTGTCATTATAAAATGGCTACAGTACTATGAATTGTACCAGTAAAGAATTTTAATTTTGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377228 True 1014 lncRNA 0.33 2 1998444 2057885

Neighbor

gene id symbol gene type direction distance location
CI01000113_01983091_01989335 NA coding upstream 9109 1983091 ~ 1989335 (+)
CI01000113_01834891_01839297 KCNJ2, KCNJ2A coding upstream 158318 1834891 ~ 1840126 (+)
CI01000113_01826332_01833431 NA coding upstream 164915 1825854 ~ 1833529 (+)
CI01000113_01761054_01815819 NA coding upstream 182447 1760927 ~ 1815997 (+)
CI01000113_01716646_01752755 NA coding upstream 245093 1715749 ~ 1753351 (+)
CI01000113_02059842_02092732 SLC9A3R2 coding downstream 1957 2059842 ~ 2093663 (+)
CI01000113_02111396_02122911 NA coding downstream 52750 2110635 ~ 2123037 (+)
CI01000113_02133051_02135286 NA coding downstream 74954 2132839 ~ 2136508 (+)
CI01000113_02147391_02148242 NA coding downstream 89506 2147391 ~ 2148434 (+)
CI01000113_02156565_02157428 NA coding downstream 98342 2156227 ~ 2157464 (+)
G331820 NA non-coding upstream 89374 1906419 ~ 1909070 (+)
G331840 NA non-coding upstream 141510 1855831 ~ 1856934 (+)
G331790 NA non-coding upstream 216754 1733674 ~ 1781690 (+)
G331793 NA non-coding upstream 241466 1755457 ~ 1756978 (+)
G331907 NA non-coding downstream 13650 2071535 ~ 2072337 (+)
G331914 NA non-coding downstream 48394 2106279 ~ 2106617 (+)
G331816 NA non-coding downstream 54798 2112683 ~ 2117151 (+)
G331818 NA non-coding downstream 60050 2117935 ~ 2118249 (+)
G331759 NA other upstream 169541 1668002 ~ 1828903 (+)
G331767 NA other upstream 335189 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 572738 1424968 ~ 1425835 (+)
G331615 NA other upstream 751871 1246291 ~ 1246573 (+)
G331487 NA other upstream 1076311 917735 ~ 922133 (+)
CI01000113_02342987_02345449 SYCE2 other downstream 285536 2342987 ~ 2346006 (+)
CI01000113_02548934_02576888 TBL3 other downstream 510882 2548934 ~ 2577790 (+)

Expression


Co-expression Network