G331948


Basic Information

Item Value
gene id G331948
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 2363574 ~ 2365297 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377366
AGTGGTTCAACCTCAGTTTTATGAAAAACAACCGCACTATTATAAGAATTTTACAAAAACGAAATTTAAAAACTTGTAAGTACAGGTGTTTGTAATTATTTTCAGCAGACACACTCATTGCCTGCTTTTACAAAACATTTCACAATAGACCCTCTTCACAGACCGTGATGACGCATTTTAACAGTCAGCATATTTTCATTTTTTAAAAAATGTATGTACATTTACAACTCTACTTAGTATAGAGTACCTCAGGGATGACGTGTTTTTGTAGGCCAACCCGAAAGTTAGCGGCGCACGGGTTCCCTCGATCGAAAGCCAATGCATTTTTCCCATAGACTTTTGGAAAATCGCAAAAAATAAGCTCTGTGTTTAACAAAGGGTTATGACACTTACACGTTTTGTCTATCAAGATAATCTTTACAAGTTAACACAACATTTATACATTTTGAAGCCTAAATAAAGTCGTCAGATATAAAAAGCTAACAGTAGGCTATAAACGGACTACAGCACACCATGGTCGCGGATCAACGTCAAGCTTCCTCAAACTTTATTTAGAAAACAACTTTATTTAAAAACATGCTCGCTGATTATGATCTGCGCTATGTATGAATACTTATCCACTTTTTCATGAGAAATGCTGTCTAAATTTCCTGTTTGTCATGATGACGTCTAAAGTCCCCGCCAAAGGAAGTAGTCCCTTTTAGCAATTTGTTAGCAACCGCCGTTTTTAAGACACAATAAAGGTTTAAAAAAAAAAATCACAAGCGGGTTATAACTGGTGTGTTTTATGTCATAGATCAAAACGTGAAAATATTTAGAGGCTTTGTTAACCACAGACCTTATTTCAGGTGATTTAGCAAAAACCCATTCAAAAAACCCACTGACTTTGGGGCGATGGAACCGGAAGTCTTAAAATGCTAACTCGCTTCCGGGTTTTGCCTACAAAAACACGTCATCCCTGAGGTACTCTATTATATTGCCTGCATCAAATTACAAAAAATTCACATGGGAAAAGAAGCAAAGCATATGTTAAAATCATTACATTGCTGATTTGATGCATGTAAACAGCAAGTCAAAAATGTCAATACTGAATATAAGTCAAAAACATGATAGCAAAGAGGTGCAGGCCTTAAAACCACCGCCAACAGTCTTGAGTTGAAACCAATATTGTGGAGTTTAGAACTGGGCAATGGGGATGCATAACAACAACATTATTCAACATTGAATGCAAAGCAGTGGCTATGCGAGATTTTTCCCCCCAAACTAGTTCAGCGGAAATCCCGCCCTGCAACCAATTTCATTGGCTGAGGTTACAGTGACACCCGTTTAGGGATACAGGTTTAGGGATCAGTGTTTGGTGTAGGCAATCGTCACTGTGATTGACATGGCCAATTAAATCTTTAGAATCGGCTCCAGGGCGGGATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377366 True 1426 lncRNA 0.38 2 2363574 2365297

Neighbor

gene id symbol gene type direction distance location
CI01000113_02342987_02345449 SYCE2 coding upstream 17568 2342987 ~ 2346006 (+)
CI01000113_02321704_02328603 FARSA, FARSA.S, SYFA coding upstream 34711 2321704 ~ 2328863 (+)
CI01000113_02300492_02320320 ILF3B, ILF3 coding upstream 43004 2297820 ~ 2320570 (+)
CI01000113_02293534_02295639 NA coding upstream 67886 2292344 ~ 2295688 (+)
CI01000113_02227694_02239947 WIZ coding upstream 123482 2227694 ~ 2240092 (+)
CI01000113_02387553_02403367 SLC44A2 coding downstream 22256 2387553 ~ 2403367 (+)
CI01000113_02418950_02434326 NA coding downstream 53653 2418950 ~ 2434456 (+)
CI01000113_02548934_02576888 TBL3 coding downstream 183637 2548934 ~ 2577790 (+)
CI01000113_02623348_02657507 TOM1L2 coding downstream 257840 2623137 ~ 2657507 (+)
CI01000113_02685260_02707606 SREBF1 coding downstream 319963 2685260 ~ 2708849 (+)
G331971 NA non-coding upstream 3608 2358189 ~ 2359966 (+)
G331939 NA non-coding upstream 113220 2249934 ~ 2250354 (+)
G331937 NA non-coding upstream 116150 2246971 ~ 2247424 (+)
G331831 NA non-coding upstream 209457 2153717 ~ 2154117 (+)
CI01000113_02133051_02135286 NA non-coding upstream 226909 2132839 ~ 2136508 (+)
G331976 NA non-coding downstream 3587 2368884 ~ 2369182 (+)
G331977 NA non-coding downstream 4475 2369772 ~ 2370011 (+)
G331978 NA non-coding downstream 5077 2370374 ~ 2370577 (+)
G331979 NA non-coding downstream 6505 2371802 ~ 2372003 (+)
G331981 NA non-coding downstream 13943 2379240 ~ 2456507 (+)
G331759 NA other upstream 534671 1668002 ~ 1828903 (+)
G331767 NA other upstream 700319 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 937868 1424968 ~ 1425835 (+)
G331615 NA other upstream 1117001 1246291 ~ 1246573 (+)

Expression


Co-expression Network