G331982


Basic Information

Item Value
gene id G331982
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 2392317 ~ 2404988 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377413
TAAATGACATTATTTTCATTTTTGGGTGAACTAACACTTATTTCCCCTAATTTCTACAAATTTATAATGACATCAGTCGTTTTTTAGATAAAATGCAAGACAGAAAACTATATCAAAAATAGTATCTTTCATCCTATTTTTAAACAGGAGATTTAAAGGATTAGGACTTTTCGGAATTCAAATTTCCTGATAATTTACTCACCCTCATGTCATCCAAGATAGATGTTCATGTCTTTCTTTCTTCAGTCGAAAAGAAATTAAGGATTTTGAGGAAAATATTCCAGGATTTTTCTCCATATAGTGGACTACAACAGGGTTCAATGGGTTGAAGGTCCAAATTGCAGTTTCAGTGCAGCTTCAAAGGGCTCTACATGATCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377413 True 381 lncRNA 0.33 2 2392317 2404988

Neighbor

gene id symbol gene type direction distance location
CI01000113_02342987_02345449 SYCE2 coding upstream 46311 2342987 ~ 2346006 (+)
CI01000113_02321704_02328603 FARSA, FARSA.S, SYFA coding upstream 63454 2321704 ~ 2328863 (+)
CI01000113_02300492_02320320 ILF3B, ILF3 coding upstream 71747 2297820 ~ 2320570 (+)
CI01000113_02293534_02295639 NA coding upstream 96629 2292344 ~ 2295688 (+)
CI01000113_02227694_02239947 WIZ coding upstream 152225 2227694 ~ 2240092 (+)
CI01000113_02418950_02434326 NA coding downstream 13962 2418950 ~ 2434456 (+)
CI01000113_02548934_02576888 TBL3 coding downstream 143946 2548934 ~ 2577790 (+)
CI01000113_02623348_02657507 TOM1L2 coding downstream 218149 2623137 ~ 2657507 (+)
CI01000113_02685260_02707606 SREBF1 coding downstream 280272 2685260 ~ 2708849 (+)
G331979 NA non-coding upstream 20314 2371802 ~ 2372003 (+)
G331978 NA non-coding upstream 21740 2370374 ~ 2370577 (+)
G331977 NA non-coding upstream 22306 2369772 ~ 2370011 (+)
G331976 NA non-coding upstream 23135 2368884 ~ 2369182 (+)
G331948 NA non-coding upstream 27020 2363574 ~ 2365297 (+)
G332017 NA non-coding downstream 54201 2459189 ~ 2459471 (+)
G332037 NA non-coding downstream 112853 2517841 ~ 2518152 (+)
G332009 NA non-coding downstream 132757 2537745 ~ 2538362 (+)
G332039 NA non-coding downstream 135439 2540427 ~ 2540655 (+)
G332042 NA non-coding downstream 150785 2555773 ~ 2557247 (+)
G331759 NA other upstream 563414 1668002 ~ 1828903 (+)
G331767 NA other upstream 729062 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 966611 1424968 ~ 1425835 (+)
G331615 NA other upstream 1145744 1246291 ~ 1246573 (+)

Expression


Co-expression Network