G332042


Basic Information

Item Value
gene id G332042
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 2555773 ~ 2557247 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377483
TTAAAATTTGTATTCGAATTCATTCAAATAAATGTAATCTTACCTGCTACTTTATTTAATTTCCGAATTATAGATCTAACGACCGAAGGTAAATTAACAAATGCAAATTACCTTTATTTTCCAGTCTATATTCGTTCAGTCAGATTTCACGCTGCAAAACATCCATGACACTGACAGCTGTTAACTTATCCATTCTGGCAGGTAATCATGGCCACCCGATGTGAAATATATAAATAATTTTAATAGCACGGCCATTCAAAACCTGAGGGTCTAACATGTGCATGGTAAAGCTATCAGTGACAATCATTTTGGGCGGGAATTAATGTAAACACAGATATCGGATACCAGTTGCATCTAAAGTGAATGTAAACACACGGGCCAAAAAATCGGATATGGTCAAAAGATCGGATCTGTGCATTAAGACTTGCAGTGTAAATGCAGCCTCCTGCTCACTTAAATTTAATTTTTAAAAACCCTAATAACTGATATTTAACATTGTTAAATGTAATCTTTAGCAAATCACAAAATGAATATTCATTATAATGTTGAGATGCCTAAATTCACTTGTGGCAATTAAAAAGATTGATTTTGGTTTTAATGCCTGCATGTAGTTTTAAAATGTACACAGTTTTTTGTTTGTTTGTCTGTTGTTGTTGTTGTTGTTGTTGTTTTTTTGGGTTGTTTAAAAACCAAAAAGTTAAGACAGATTACTGGATTAGCCAATGGCTGTGAGGTTCATGACACAGAAACACACAGACATACATCTTAAAGGGGTACTTCACTGGCAAAATGGGCTTTTAATAAAACTTTGAATAAAAAAGAAAGGCGAAACATTTTTTGAAATCTGTGCTACCTGAACAGAGAAAACTGAGAAAGGTTTTTGTCTTCCCTTTTGCCAAATAGTTAGCACATCCAGCAGACTATTGCTGACTAACATGAATTGTCCAGTTAACATGGAGAATGAGTAAACAGTGTTCATTTACATATACTACCGCATTGTAACAATACAAAGCAGGTTGAAAATCTGCAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377483 True 1032 lncRNA 0.34 2 2555773 2557247

Neighbor

gene id symbol gene type direction distance location
CI01000113_02418950_02434326 NA coding upstream 121317 2418950 ~ 2434456 (+)
CI01000113_02387553_02403367 SLC44A2 coding upstream 152406 2387553 ~ 2403367 (+)
CI01000113_02342987_02345449 SYCE2 coding upstream 209767 2342987 ~ 2346006 (+)
CI01000113_02321704_02328603 FARSA, FARSA.S, SYFA coding upstream 226910 2321704 ~ 2328863 (+)
CI01000113_02300492_02320320 ILF3B, ILF3 coding upstream 235203 2297820 ~ 2320570 (+)
CI01000113_02623348_02657507 TOM1L2 coding downstream 65890 2623137 ~ 2657507 (+)
CI01000113_02685260_02707606 SREBF1 coding downstream 128013 2685260 ~ 2708849 (+)
G332039 NA non-coding upstream 15118 2540427 ~ 2540655 (+)
G332009 NA non-coding upstream 17411 2537745 ~ 2538362 (+)
G332037 NA non-coding upstream 37621 2517841 ~ 2518152 (+)
G332017 NA non-coding upstream 96302 2459189 ~ 2459471 (+)
G331981 NA non-coding upstream 99266 2379240 ~ 2456507 (+)
G332011 NA non-coding downstream 45091 2602338 ~ 2604908 (+)
G332054 NA non-coding downstream 145687 2702934 ~ 2703362 (+)
G332057 NA non-coding downstream 154429 2711676 ~ 2711928 (+)
G332058 NA non-coding downstream 154910 2712157 ~ 2712373 (+)
G332098 NA non-coding downstream 228173 2785420 ~ 2785663 (+)
G331759 NA other upstream 726870 1668002 ~ 1828903 (+)
G331767 NA other upstream 892518 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 1130067 1424968 ~ 1425835 (+)
G331615 NA other upstream 1309200 1246291 ~ 1246573 (+)
CI01000113_02548934_02576888 TBL3 other downstream 11520 2548934 ~ 2577790 (+)

Expression


Co-expression Network