G332057


Basic Information

Item Value
gene id G332057
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000113
NCBI id null
chromosome length 2886875
location 2711676 ~ 2711928 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU377498
GGCAAAGTCACGTGAGCTTTTTGTTGCATATCGAGGGATTTATTCAGTAGCCCTATGTTTTTGTTTTTTTGTTTTTTAGCACTGAATATTCCTTTCATACAGAAAAGGTATAATTTCCAGAAATAAATACAGAAACTCATGTGTGCTGGTGGTTGGGTAATAAGATGTTGATTTCACATGGGCTTAACATTTGTGACAAACTAGAGATAGAATGGCTTTGTTTTCACTTCGCTAAACCAACAGAAACCCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU377498 True 253 lncRNA 0.36 1 2711676 2711928

Neighbor

gene id symbol gene type direction distance location
CI01000113_02685260_02707606 SREBF1 coding upstream 2827 2685260 ~ 2708849 (+)
CI01000113_02623348_02657507 TOM1L2 coding upstream 54169 2623137 ~ 2657507 (+)
CI01000113_02548934_02576888 TBL3 coding upstream 133886 2548934 ~ 2577790 (+)
CI01000113_02418950_02434326 NA coding upstream 277220 2418950 ~ 2434456 (+)
CI01000113_02387553_02403367 SLC44A2 coding upstream 308309 2387553 ~ 2403367 (+)
G332054 NA non-coding upstream 8314 2702934 ~ 2703362 (+)
G332011 NA non-coding upstream 106768 2602338 ~ 2604908 (+)
G332042 NA non-coding upstream 154429 2555773 ~ 2557247 (+)
G332039 NA non-coding upstream 171021 2540427 ~ 2540655 (+)
G332009 NA non-coding upstream 173314 2537745 ~ 2538362 (+)
G332058 NA non-coding downstream 229 2712157 ~ 2712373 (+)
G332098 NA non-coding downstream 73492 2785420 ~ 2785663 (+)
G332069 NA non-coding downstream 75258 2787186 ~ 2788491 (+)
G332102 NA non-coding downstream 83655 2795583 ~ 2803940 (+)
G332143 NA non-coding downstream 149653 2861581 ~ 2861898 (+)
CI01000113_02342987_02345449 SYCE2 other upstream 359806 2342987 ~ 2346006 (+)
G331759 NA other upstream 882773 1668002 ~ 1828903 (+)
G331767 NA other upstream 1048421 1662785 ~ 1663255 (+)
CI01000113_01424978_01425704 NA other upstream 1285970 1424968 ~ 1425835 (+)

Expression


Co-expression Network