XLOC_011286


Basic Information

Item Value
gene id XLOC_011286
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 12260902 ~ 12278529 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024601
actaaatattttgaGTTCAACAAAGTTTAACTTTGTAacaattttagtcagtttgagttgagatgactagaaaagttcaatTGATTCAACTGAAAAACTTTCAAGCAGCAAAAATTATGACCCATAGATGTTAGAAATGCAATAGATTTAAGAGCTAATTAattttttgagtgaacaattttATGTTCATTATCTTCTATTATTTTAACTTAAGATTTGGAACAAATACCCAAATTGAATGTTCCAAAATATACAAGAATAGGCTCAGAAACAAGCTTTCCCTAAATATATGTTAGTCTTAAGTGTTCTACAGAGTGCAAAATGCCAGAAGTGCACGTAGGATGTCACTAGCAGAAATCAGCCATACATGTTCTTTTGAGTGCCCTTAAGTGTTCAAAACACTGCCAACAGTGATCTTCCCTCTCAaaggtgatgatgaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024601 True 440 lncRNA 0.32 2 12260902 12278529

Neighbor

gene id symbol gene type direction distance location
XLOC_011285 pimr175 coding upstream 875 12255642 ~ 12260027 (+)
XLOC_011284 sccpdha.1 coding upstream 85130 12159529 ~ 12175772 (+)
XLOC_011283 sccpdha.2 coding upstream 104888 12138715 ~ 12156014 (+)
XLOC_011282 NA coding upstream 123150 12135990 ~ 12137752 (+)
XLOC_011281 cnsta coding upstream 125432 12075805 ~ 12135470 (+)
XLOC_011289 pimr174 coding downstream 6756 12285285 ~ 12288484 (+)
XLOC_011290 khk coding downstream 129659 12408188 ~ 12423175 (+)
XLOC_011291 gpn1 coding downstream 379882 12658411 ~ 12675267 (+)
XLOC_011292 stmn4l coding downstream 420003 12698532 ~ 12711195 (+)
XLOC_011293 il17a/f2 coding downstream 451496 12730025 ~ 12733858 (+)
XLOC_011276 NA non-coding upstream 765469 11492850 ~ 11495433 (+)
XLOC_011275 NA non-coding upstream 841280 11418483 ~ 11419622 (+)
XLOC_011274 CU076099.4 non-coding upstream 858942 11401947 ~ 11401960 (+)
XLOC_011273 NA non-coding upstream 881049 11377992 ~ 11379853 (+)
XLOC_011296 BX294369.1 non-coding downstream 522935 12801464 ~ 12801579 (+)
XLOC_011297 BX649530.2 non-coding downstream 590301 12868830 ~ 12868944 (+)
XLOC_011298 NA non-coding downstream 658991 12937520 ~ 12937921 (+)
XLOC_011304 NA non-coding downstream 943303 13221832 ~ 13601942 (+)
XLOC_011306 BX005443.1 non-coding downstream 1534894 13813423 ~ 14059995 (+)

Expression


Co-expression Network