XLOC_011330


Basic Information

Item Value
gene id XLOC_011330
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 15595784 ~ 15596021 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024461
ggccttcatcgcagcttgcgcctatgttttatatatggtgtcctccaccattcagaggaatttgtgggtacgagagagatctcaggtctggtgggaagAATTTGTGGCGGCCTTTACTGAGGAGCAGTGGGTCCAAAATTTTAGGATGAgtacacacacactcttccttCTATatcattaaaccgcggagaagtaccacattgtcgcaagtttaatgatgtacaaaacAGAAAGCccc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024461 True 238 lncRNA 0.46 1 15595784 15596021

Neighbor

gene id symbol gene type direction distance location
XLOC_011328 marcksb coding upstream 56083 15534815 ~ 15539701 (+)
XLOC_011327 CU306817.2 coding upstream 78552 15517118 ~ 15517232 (+)
XLOC_011326 fabp7a coding upstream 159897 15433518 ~ 15435887 (+)
XLOC_011325 cx40.8 coding upstream 178567 15413412 ~ 15417217 (+)
XLOC_011324 si:ch211-266g18.6 coding upstream 184799 15388479 ~ 15410985 (+)
XLOC_011331 rragd coding downstream 192079 15788100 ~ 15820304 (+)
XLOC_011332 gabrr2a coding downstream 249744 15845765 ~ 15892623 (+)
XLOC_011333 syne3 coding downstream 303018 15899039 ~ 15966746 (+)
XLOC_011334 CR450701.1 coding downstream 305404 15901425 ~ 15901547 (+)
XLOC_011335 clmn coding downstream 387226 15983247 ~ 16034453 (+)
XLOC_011323 NA non-coding upstream 277567 15297233 ~ 15318217 (+)
XLOC_011322 NA non-coding upstream 319639 15230045 ~ 15276145 (+)
XLOC_011320 NA non-coding upstream 410491 15185033 ~ 15185293 (+)
XLOC_011319 CU464134.1 non-coding upstream 426069 15157213 ~ 15169715 (+)
XLOC_011338 NA non-coding downstream 514150 16110171 ~ 16120963 (+)
XLOC_011341 BX927159.1 non-coding downstream 942184 16538205 ~ 16538320 (+)
XLOC_011345 NA non-coding downstream 1468201 17064222 ~ 17065104 (+)
XLOC_011346 NA non-coding downstream 2099814 17695835 ~ 17701349 (+)

Expression


Co-expression Network