CI01000120_00322439_00323110


Basic Information

Item Value
gene id CI01000120_00322439_00323110
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 322347 ~ 323212 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000120_00322439_00323110.mRNA
CTGTAAAAACCCAGGATCTGTCCTGGGAATTGTCTCAACTCTCCATTGAGAAATCAAGCCTGATGAGCATGGAGTAGAACATCCACGTCAGGATGACTGATATGCAGTTGAAGTTGGCAAGCATGCAAATAGAAAATGGTTCAATACCGGACCCTGTCCATCTGAATGATGTACAAAAATGCCTTTCCCAAATCCAAAACATTCTGATTCAGCTTCAGAAGTTCTGGGAATCAGTGAGTGTAATGCTGGAGGCTCTCAAAGACAAAACGTTTGCTAATGAATGCTTCATCGAGGAGAGTGAAATGAAGGAGATCTTTCTGGAGTCTATTCGTACAGCAAAAGGGCATTGGAAAGCTTTCCGTGAATCCTGTCTGAATGCAAAGAGCATCTTTAGCTTGCAGACTAAAGATGCGTATAAGTTCCTGGAGACCAGCCCATCTTCACTGTCACAAGAGGAATGGAAAAAACAGTATGACGCTGTTATAGTGGATCTGAACAAATTACATTCTGATCCTTTCACTCAAAAAGCACCAGCTCCCATTACTCAGTAATGTAGGAACATAAGAAGTCTTTACAGTACAAGTAGCATACATGCCTATAATGTTTCAGGCTTACTGCTTTGAATAACACTTGTTATTTATGATGCTGTTTTA

Function

NR:

description
hypothetical protein cypCar_00039823, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000120_00322439_00323110.mRNA True 653 mRNA 0.41 3 322347 323212

Neighbor

gene id symbol gene type direction distance location
CI01000120_00308876_00311801 NA coding upstream 10447 308688 ~ 311900 (+)
CI01000120_00149999_00157598 NA coding upstream 163676 149999 ~ 158671 (+)
CI01000120_00051711_00088727 DUSP8, DUSP8A coding upstream 233620 51711 ~ 88727 (+)
CI01000120_00002703_00007355 NA coding upstream 314418 2703 ~ 7929 (+)
CI01000120_00451804_00456525 NA coding downstream 126318 449530 ~ 457774 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding downstream 135815 459027 ~ 461043 (+)
CI01000120_00477162_00480891 NA coding downstream 153787 476999 ~ 481125 (+)
CI01000120_00612213_00613803 NA coding downstream 289001 612213 ~ 614230 (+)
CI01000120_00639875_00643491 RASK, KRAS coding downstream 315839 639051 ~ 643520 (+)
G338185 NA non-coding upstream 26745 295313 ~ 295602 (+)
G338156 NA non-coding upstream 102799 219245 ~ 219548 (+)
G338124 NA non-coding upstream 152630 169438 ~ 169717 (+)
G338110 NA non-coding upstream 153085 163941 ~ 169262 (+)
G338134 NA non-coding upstream 222977 99111 ~ 99370 (+)
G338188 NA non-coding downstream 823 324035 ~ 324462 (+)
G338189 NA non-coding downstream 1303 324515 ~ 324771 (+)
G338190 NA non-coding downstream 1666 324878 ~ 353140 (+)
G338233 NA non-coding downstream 76132 399344 ~ 399553 (+)
G338223 NA non-coding downstream 91002 414214 ~ 464433 (+)
G338386 NA other downstream 440065 763277 ~ 763643 (+)
G338458 NA other downstream 541346 864558 ~ 865315 (+)
G338464 NA other downstream 555599 878811 ~ 879593 (+)
G338508 NA other downstream 683853 1007065 ~ 1009403 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L other downstream 816628 1141788 ~ 1145086 (+)

Expression


Co-expression Network