XLOC_011359


Basic Information

Item Value
gene id XLOC_011359
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 19017530 ~ 19020033 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024666
AAAAAAGAAGGcgatattgttcagaatataaATTACATATTGTACAGTCTGTCTTTTGAAATACAGTGCATTTAAGAGTCAGATCTGAATACAAAGGACATTATCGGCTCAAAATCATCATTTATGGCATGTGTCAGACTCTGGAACACTGTTTTTGCAGTATGCTGTGCTATTGTTTCTCCTTTGAGAGTCTCTGAATCCAACACCCCCATTAGGGGTGTAAATCGGCTGGATGTGAAAGTCCCCCTTGAGCAGCTGTTCGTTATTCAAAGAAACTATCTGAAAGCTGGTCTCAGTCATTTCCAGAATAGAGTTATCCTTTTTAGTCCCCGCCTCGCAGTAGTCATCTTTTCTTCTGCCCCGACTGTATTTCCATTTTGATGAATCTGACCTTCCCTTCTTGTGCATGTGCCAGCAGAATATGCTCAACAGGACCACCAGGACCACAAGCACTGCCCCACCAATCAGGCCAGCCAGTAGGAAAGGCGAGCTGGGGTCCTGCTGGGTTGCCTGCTCAGGCCCAGTTGCGTTATCGCCAGAGTGAAAAGAAGCAGACTTTGTCGTCACCTCTGAGCAAATTGTATCATCCCCCGGGTGATAATTATTGAATGCATCTAGTGGATCCACACAAATACGATAAGTGGACTTGGGCTCCAAGTTTCTCAGTGTGATTCCATCAAGTTTGCCCTCCACAAGTGACTCCTGCATGGGGCCGGTTATCAAATTCGGACTCAGTTTGACCCAGGTCACCTTATAGGCTGTGACGGCAAATGTTGATACCCAGCTTACCTGAATGCACGAACTGTTAAGCACCACAAAGGAGATGCGCATCGACTCCTGCCTCGGGCCGATAGGATCATTTGTCCTCTGTTCTATATCTTCGCCTGTAGTCGGCAGGAGTAGTGTGAGAGGTGGAGGGCTGGGTGTAGGCTGGGTGCGTGCGGGTGTGAAGGCCGTTTGAGTGGCTGACTCAGCGGTGGAGGAAGAAAGCAGTGTGGGCTGTGGGACTGTGCCGGTGCTGTTAGGACACTGGATGAGCTCCAGGGTTAGCTCTCTGATTACCATGCCACGTACCCTCTCTGGTTTCTGGCACATGAAGCCACGGACGTTGAGGGTAGCTGGCAGGGACTTTAACCACAGTATGACCCATTTAATGTCGCAGTCACAGAGCCAAAGGTTGTTTCGAACAGTGAGCTGTCTCAGACTGTGAAGGCCGTCAAAGGAATCTCATTCATCTGATTATCCTGCAAGTTCAGCTTGATTAGAAACTCTGTGGGCAGGTTAGGAGGAGGAACCGTGAGGGAGTTCCGCGCCATTGACAAGGTTTTGAGATTAGCGAGCGTCTGGAGAGACCCGGGGGTGATGCCCTCATCCGTGAGCAGGTTCCCGTCCAGGAGAAGAAGTTCGAGACCTGTCACGTTCTCGAAAGCGTCCTCGGTTATAAGTGCAATGCGATTCTCATCTAGCCGCAACTCTCTTAGCTCTTCGGGCAGGCCGATGGGGATGCTGCTCAGGTGGTTCTTGGTAAGGAAAATGGTCTTGAGACTGATGGCCTCCCTGAAGGCCCCCTCCTCCACACCCACAGTGGAGATGGAGTTGTCATCCAGATAGAGCTCCTCCAGGCGTAGCAGCTGTGCGAGGGCGGCCCTGGACACCGTCTGAATGTTATTCTCCTGCAGGTGGAGCACCCGCACGTTTTTGGGAAGATTGACAGGGAATTCGTCGAGCTGGTTGCCATAGAGATACACCGTCTCCACTGAGGCAACATTGTGCATTTCCAGGGGAAATCCAGCATTGTTGATTTGATTGTTGTGGAGGTAGAGAGTCTTATAACCCTCTCCTAGCCCTAGAGGCACTGACGTTAGACTCCTCTCGTTGCAGTAAACAAAGGTCCTGTCACAGCGGCACTCCTCTGGACAGGTTGTGGCCCAGGAGAAATGCATGTGAAGACCTAGAAGTATCGGTATCCACGGGCTGATCAAAGCTGGCAGGTCTTTATTCCACATTCGGATCTGTACCTCCATTTTGTAAGACTTTACAAACTTTTGACAACAACAACAGTGCACGTAATTAAAAAgggtgagaaaaaaaatcaaataaaatccacCACACTGGAGTTCTTAGCGGATCTCAAAGCTTGCCTCGGTGGAGAGTATGCGATGTTGAAGTCGCTGGGTAATCCTCCTGTAATTGCCTGTCCTAAGCTCCCCAACACAAGAGCAATAGTCTCATTAACTCGTGCGACTCCCTCTCATCCCTCCGTCCATGCTCAGGCTGGAAATGATAGCAGAGCTCATCACATTGTCACTCTGAGTTTAGGGAGAGATGATTTCAAAGTGTGTGGGCCAGAGCAGTAAGAATGGAGGGCTCATCGGAGATGACCTCCTCTCTCATCGCAGCTGGACGATTCCCGTAAGGCACA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024666 True 2422 lncRNA 0.50 2 19017530 19020033

Neighbor

gene id symbol gene type direction distance location
XLOC_011357 si:dkey-288a3.2 coding upstream 145380 18810904 ~ 18872150 (+)
XLOC_011355 NA coding upstream 216984 18798007 ~ 18800546 (+)
XLOC_011356 CU929218.1 coding upstream 218399 18798995 ~ 18799131 (+)
XLOC_011354 NA coding upstream 332173 18625593 ~ 18685357 (+)
XLOC_011353 NA coding upstream 468696 18237206 ~ 18548834 (+)
XLOC_011360 NA coding downstream 188442 19208475 ~ 19300172 (+)
XLOC_011361 NA coding downstream 287029 19307062 ~ 19307406 (+)
XLOC_011362 kif11 coding downstream 461016 19481049 ~ 19497006 (+)
XLOC_011363 slc22a15 coding downstream 479124 19499157 ~ 19511206 (+)
XLOC_011364 CU571091.1 coding downstream 493538 19513571 ~ 19531819 (+)
XLOC_011350 NA non-coding upstream 991839 17914340 ~ 18025691 (+)
XLOC_011365 NA non-coding downstream 586887 19606920 ~ 19614265 (+)
XLOC_011367 NA non-coding downstream 1153785 20173818 ~ 20189395 (+)

Expression


Co-expression Network