G338134


Basic Information

Item Value
gene id G338134
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 99111 ~ 99370 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384600
ATGTGCTTGGACACAGAGCTCTGTGAACAGCCAGCCTCTTTTGCAATGACCTTTTGTGTCTTGCCCTCCTTGTGCAAGGTGTCAATGGTCGTATTTTGGACAACTGTCAAGTCAGCAGTCTTCCCCATAATTGTGTAGCCTACAGAACTAGACTGAGAGACCATTTAAAGGCCTTTACAGGTGTTTTGAGTTAATTAGCTGATTAGAGTGTGGCACCAGGTGTCTTCAATATTGAACCTTTTCACAATATTCTAATTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384600 True 260 lncRNA 0.42 1 99111 99370

Neighbor

gene id symbol gene type direction distance location
CI01000120_00051711_00088727 DUSP8, DUSP8A coding upstream 10384 51711 ~ 88727 (+)
CI01000120_00002703_00007355 NA coding upstream 91182 2703 ~ 7929 (+)
CI01000120_00149999_00157598 NA coding downstream 50629 149999 ~ 158671 (+)
CI01000120_00308876_00311801 NA coding downstream 209318 308688 ~ 311900 (+)
CI01000120_00322439_00323110 NA coding downstream 222977 322347 ~ 323212 (+)
CI01000120_00451804_00456525 NA coding downstream 350160 449530 ~ 457774 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding downstream 359657 459027 ~ 461043 (+)
G338120 NA non-coding upstream 27373 63186 ~ 71738 (+)
G338125 NA non-coding upstream 68099 30703 ~ 31012 (+)
G338130 NA non-coding upstream 74401 20606 ~ 24710 (+)
G338110 NA non-coding downstream 64571 163941 ~ 169262 (+)
G338124 NA non-coding downstream 70068 169438 ~ 169717 (+)
G338156 NA non-coding downstream 119875 219245 ~ 219548 (+)
G338185 NA non-coding downstream 195943 295313 ~ 295602 (+)
G338188 NA non-coding downstream 224665 324035 ~ 324462 (+)
G338386 NA other downstream 663907 763277 ~ 763643 (+)
G338458 NA other downstream 765188 864558 ~ 865315 (+)
G338464 NA other downstream 779441 878811 ~ 879593 (+)
G338508 NA other downstream 907695 1007065 ~ 1009403 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L other downstream 1040470 1141788 ~ 1145086 (+)

Expression


Co-expression Network