G338156


Basic Information

Item Value
gene id G338156
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 219245 ~ 219548 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384622
CGGTCAAACAGACCTCACAGAGGAACGGTGTTGAACTGCTTGAATACGTTCAAAGGCAGGACAGCGGTGGCTTCATGGTCGAGTCCTGAGATGGGTGTGGCAACGCGGCACATACCGAGTGGCAACCACTCCGGAATGCCGCCAAGCCTTCAGCCCGTGGTCGGACCCCTTGTTTCTTTGGGCAGGAGTGCCCCTAGAGCAGGTGTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384622 True 209 lncRNA 0.59 2 219245 219548

Neighbor

gene id symbol gene type direction distance location
CI01000120_00149999_00157598 NA coding upstream 60574 149999 ~ 158671 (+)
CI01000120_00051711_00088727 DUSP8, DUSP8A coding upstream 130518 51711 ~ 88727 (+)
CI01000120_00002703_00007355 NA coding upstream 211316 2703 ~ 7929 (+)
CI01000120_00308876_00311801 NA coding downstream 89140 308688 ~ 311900 (+)
CI01000120_00322439_00323110 NA coding downstream 102799 322347 ~ 323212 (+)
CI01000120_00451804_00456525 NA coding downstream 229982 449530 ~ 457774 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding downstream 239479 459027 ~ 461043 (+)
CI01000120_00477162_00480891 NA coding downstream 257451 476999 ~ 481125 (+)
G338124 NA non-coding upstream 49528 169438 ~ 169717 (+)
G338110 NA non-coding upstream 49983 163941 ~ 169262 (+)
G338134 NA non-coding upstream 119875 99111 ~ 99370 (+)
G338120 NA non-coding upstream 147507 63186 ~ 71738 (+)
G338125 NA non-coding upstream 188233 30703 ~ 31012 (+)
G338185 NA non-coding downstream 75765 295313 ~ 295602 (+)
G338188 NA non-coding downstream 104487 324035 ~ 324462 (+)
G338189 NA non-coding downstream 104967 324515 ~ 324771 (+)
G338190 NA non-coding downstream 105330 324878 ~ 353140 (+)
G338233 NA non-coding downstream 179796 399344 ~ 399553 (+)
G338386 NA other downstream 543729 763277 ~ 763643 (+)
G338458 NA other downstream 645010 864558 ~ 865315 (+)
G338464 NA other downstream 659263 878811 ~ 879593 (+)
G338508 NA other downstream 787517 1007065 ~ 1009403 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L other downstream 920292 1141788 ~ 1145086 (+)

Expression


Co-expression Network