G338185


Basic Information

Item Value
gene id G338185
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 295313 ~ 295602 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384653
CATTCCTATTCCTAAACTTGAGAAACTTGTCTCCTCAGTCCCCAGACGTTTGCAGACTGTTATAAAAAGAAGAGGGGATGCCATACAGTGATAAACATGGCCTTGTCCCAACTTTTTTGAGATGTGTTGATGCCATGAAATTTAAAATCAACTTATTTTTCCCTTAAAATGATACATTTTCTCAGTTTAAACATTTGATATGTCATCTATGTTGTATTCTGAATAAAATATTGAAATTTGAAACTTCCACATCATTGCATTCGTTTTTTATTCACAATTTGTACAGTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384653 True 290 lncRNA 0.33 1 295313 295602

Neighbor

gene id symbol gene type direction distance location
CI01000120_00149999_00157598 NA coding upstream 136642 149999 ~ 158671 (+)
CI01000120_00051711_00088727 DUSP8, DUSP8A coding upstream 206586 51711 ~ 88727 (+)
CI01000120_00002703_00007355 NA coding upstream 287384 2703 ~ 7929 (+)
CI01000120_00308876_00311801 NA coding downstream 13086 308688 ~ 311900 (+)
CI01000120_00322439_00323110 NA coding downstream 26745 322347 ~ 323212 (+)
CI01000120_00451804_00456525 NA coding downstream 153928 449530 ~ 457774 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding downstream 163425 459027 ~ 461043 (+)
CI01000120_00477162_00480891 NA coding downstream 181397 476999 ~ 481125 (+)
G338156 NA non-coding upstream 75765 219245 ~ 219548 (+)
G338124 NA non-coding upstream 125596 169438 ~ 169717 (+)
G338110 NA non-coding upstream 126051 163941 ~ 169262 (+)
G338134 NA non-coding upstream 195943 99111 ~ 99370 (+)
G338120 NA non-coding upstream 223575 63186 ~ 71738 (+)
G338188 NA non-coding downstream 28433 324035 ~ 324462 (+)
G338189 NA non-coding downstream 28913 324515 ~ 324771 (+)
G338190 NA non-coding downstream 29276 324878 ~ 353140 (+)
G338233 NA non-coding downstream 103742 399344 ~ 399553 (+)
G338223 NA non-coding downstream 118612 414214 ~ 464433 (+)
G338386 NA other downstream 467675 763277 ~ 763643 (+)
G338458 NA other downstream 568956 864558 ~ 865315 (+)
G338464 NA other downstream 583209 878811 ~ 879593 (+)
G338508 NA other downstream 711463 1007065 ~ 1009403 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L other downstream 844238 1141788 ~ 1145086 (+)

Expression


Co-expression Network