G338188


Basic Information

Item Value
gene id G338188
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 324035 ~ 324462 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384660
TTAAGATATGTCAGGACAAGTTGCTTTCAGTTAAACAGCTCAAACATGCAGTTTAGTCTAAGACTAGCTTAAGCCTTGTCTGTGTAATCGGGGGATGGGATGGTCTTTCCTTCATGACTTAAACGCACCAACAAATTGATTCACAGTGTTTGGGCAACCCGTTTGACCAGTTCACAGAAAATAACTGATACCCTGACCATTATAGTGTGCTTTCACACAGGTCCGTTTGATGTCAGAGATTGGCTCATTTGAATGTGATGCGAACCCGGTTTTCATAACTCGTGTGCACAATCGTGAACCGTGTGTGAAAGCAACTGTAGTTGACTAGTCATTACATAGCAACAGAGGTAAACAGCAGTTGCTTTGATTACATAAACTAAAATATGGGGTTCGACCCAAAAAATACAGATTGAATAAAATTGAGCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384660 True 428 lncRNA 0.41 1 324035 324462

Neighbor

gene id symbol gene type direction distance location
CI01000120_00322439_00323110 NA coding upstream 823 322347 ~ 323212 (+)
CI01000120_00308876_00311801 NA coding upstream 12135 308688 ~ 311900 (+)
CI01000120_00149999_00157598 NA coding upstream 165364 149999 ~ 158671 (+)
CI01000120_00051711_00088727 DUSP8, DUSP8A coding upstream 235308 51711 ~ 88727 (+)
CI01000120_00002703_00007355 NA coding upstream 316106 2703 ~ 7929 (+)
CI01000120_00451804_00456525 NA coding downstream 125068 449530 ~ 457774 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding downstream 134565 459027 ~ 461043 (+)
CI01000120_00477162_00480891 NA coding downstream 152537 476999 ~ 481125 (+)
CI01000120_00612213_00613803 NA coding downstream 287751 612213 ~ 614230 (+)
CI01000120_00639875_00643491 RASK, KRAS coding downstream 314589 639051 ~ 643520 (+)
G338185 NA non-coding upstream 28433 295313 ~ 295602 (+)
G338156 NA non-coding upstream 104487 219245 ~ 219548 (+)
G338124 NA non-coding upstream 154318 169438 ~ 169717 (+)
G338110 NA non-coding upstream 154773 163941 ~ 169262 (+)
G338134 NA non-coding upstream 224665 99111 ~ 99370 (+)
G338189 NA non-coding downstream 53 324515 ~ 324771 (+)
G338190 NA non-coding downstream 416 324878 ~ 353140 (+)
G338233 NA non-coding downstream 74882 399344 ~ 399553 (+)
G338223 NA non-coding downstream 89752 414214 ~ 464433 (+)
G338273 NA non-coding downstream 203164 527626 ~ 527848 (+)
G338386 NA other downstream 438815 763277 ~ 763643 (+)
G338458 NA other downstream 540096 864558 ~ 865315 (+)
G338464 NA other downstream 554349 878811 ~ 879593 (+)
G338508 NA other downstream 682603 1007065 ~ 1009403 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L other downstream 815378 1141788 ~ 1145086 (+)

Expression


Co-expression Network