G338273


Basic Information

Item Value
gene id G338273
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 527626 ~ 527848 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384752
CCCTCATGTCGTTCCACACCCGTAAGACCTTCGTTCATCTTTGGAACACAAATTAAGATATTTTTGATAAAATCCGATGGCTCAGTAAGGCCTGCATCACCAGCAATAACACTCCTTTTTTCAATGCCCAGAAAGCTACTAAAAACATATTTAAAACAGTTAATATGACTACAGTGGTTCAACCTTAATATTATAAAGTGACTAGAATACTTTTTGTGTGGCA

Function

NR:

description
otoferlin-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384752 True 223 lncRNA 0.36 1 527626 527848

Neighbor

gene id symbol gene type direction distance location
CI01000120_00477162_00480891 NA coding upstream 46501 476999 ~ 481125 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding upstream 66583 459027 ~ 461043 (+)
CI01000120_00451804_00456525 NA coding upstream 69852 449530 ~ 457774 (+)
CI01000120_00322439_00323110 NA coding upstream 204414 322347 ~ 323212 (+)
CI01000120_00308876_00311801 NA coding upstream 215726 308688 ~ 311900 (+)
CI01000120_00612213_00613803 NA coding downstream 84365 612213 ~ 614230 (+)
CI01000120_00639875_00643491 RASK, KRAS coding downstream 111203 639051 ~ 643520 (+)
CI01000120_00704598_00707678 NA coding downstream 176439 704287 ~ 708495 (+)
CI01000120_00731213_00760512 NA coding downstream 203132 730936 ~ 760760 (+)
CI01000120_01093808_01118807 NA coding downstream 565960 1093808 ~ 1118807 (+)
G338223 NA non-coding upstream 63193 414214 ~ 464433 (+)
G338233 NA non-coding upstream 128073 399344 ~ 399553 (+)
G338190 NA non-coding upstream 174486 324878 ~ 353140 (+)
G338189 NA non-coding upstream 202855 324515 ~ 324771 (+)
G338188 NA non-coding upstream 203164 324035 ~ 324462 (+)
G338209 NA non-coding downstream 10988 538836 ~ 554633 (+)
G338281 NA non-coding downstream 28497 556345 ~ 556563 (+)
G338283 NA non-coding downstream 31604 559452 ~ 559690 (+)
G338219 NA non-coding downstream 34108 561956 ~ 567392 (+)
G338289 NA non-coding downstream 54142 581990 ~ 582195 (+)
G338386 NA other downstream 235429 763277 ~ 763643 (+)
G338458 NA other downstream 336710 864558 ~ 865315 (+)
G338464 NA other downstream 350963 878811 ~ 879593 (+)
G338508 NA other downstream 479217 1007065 ~ 1009403 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L other downstream 611992 1141788 ~ 1145086 (+)

Expression


Co-expression Network