XLOC_011363 (slc22a15)


Basic Information

Item Value
gene id XLOC_011363
gene name slc22a15
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 19499157 ~ 19511206 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00022639
ATTCCACGTCTGCGAAGGGAAGCCAGATTTACAGCGGAGCATCTGAAACCTCGACTGCTATCAAACCTTAAAGAAATTTAAAGATGAAAATATCCAGTCGGTGTCATGCAGTTGGATGAATTGAGTCTGGAATGGATTTAGAGGAGGCTTTCCAGGTGGTTGGAGAGTTCGGAAGTCACCAGAAGCGGATGATCACAGTGCTGGTGTTCCTCCAGaTTTACATGGCATGTCAGTCCATGCTCATCATCTTAGTGGGTGCTGTGCCAGAATATCACATAGAACCAGTAACTGAAGGTGTGGATGGAGACGTAACCCAAAGTGTGAAATTCACAGAGGATGTCAACTCAATTGTGACTGAGtggtACCTGGTTAAACATCAAGCCTACAAAGTGAATTTGGCTGGGTCTCTGTTCTTTGCTGGTGTGCTGATTGGAAATGTCGTGTTTGGACCACTATCTGATAAAATTGGGAGGAAACCTGTTTTTTTAACTGGTCTGTTTTTTGAGGTCTTGTTTGGTTATGGAACCGCATTAGCACCCAGTTATGAGGCGTTCGCTGTGTCTCGGCTGCTGGTTGGTGTGATGAATGGAGGAATGGCGTTGGTCTGCTTTGTTTTGACTCAGGAATATGTGGGAAAGTCCTACTGGGCGATGACAGGGACCTTGACTAATATGACCTTTGCAGTGGGCATCTCTCTGTTCGCTGCGTTGGGTTATTATGTTCGGCCGTGGCGAAACCTCGCAACTGCTGCCAACTGTCCTGGACTTTTGCTCTtcctgctgtgtgtGACTTTGCCAGAATCTCCCCGATGGCTTTACTCTCGGGGTTACACAGAGAAGGCTGAGGACATCCTGCAGGATTTCGCATTGAGGAATGGGAAAGGCAGAATTGTGGTGAAGCTCCGGCGGGCCTTCAGCTCTCCAAACTCATCCAGTCCCGGGGTCTTCCAGCTGGTCACACATCCCGTACTACGCTGGAGGACTGTGGTGCTCATGTATGTGTGGTATGCCTGTAGCCTCGTTTATTACGGCCTCACTCTCAGTGCCGGTGAAGATAAAGGTAATCGTTACCTTAGTGTTGCCATGTATGGCTTGGTGGAACTGCCTGCTTATCCTCTCTGCATGTACTTCATTAACAAACAGTGgGCAGGCAGGAGAAAGTCAATGGCCAATTTTCTTGCCTTTGCAGGCATATCTTGTCTGCTCACAATGGTTGTACCTGTATCAGGGTCTTTATTAAGTGCCACATCGCTGGCTCTAGTGGGAAAACTGATGGTCAGTGCTGcttttaatattgtgtatgtgTATACATCAGAACTCTACCCAACCGTGATCAGGAATGCAGGTTTGGGAGTGTGTTCAATGTCTTGTAGAGTTGGGGGAATTCTGGCACCATTTGTACCAAGTATGAAATCACTGCACACCTCAATGCCGTTTATGGTGTTCTGCTTGAGTGGGATTTCTGCAGGCTGTCTGGGTCTCCTCCTGCCGGAGACTCTTAATAAACCTGCAGCTGAAACGCTCGATGAGCTGCACAGCCCCTCATACCAGCGCATCCTCGAGCCACAGGTCCGCCTTTTGGAGGAAAAGCACTTAACTGACCACAATGAAGATGGTAGTGACTGAGACAAggacttaaaaaaatatctagcatACATTCCTGCACACAGTTGACCTGAGCCAGTGTTTTGTCCAGAGCCAGACAGAGCGAAAGACTGACGGTGCCTTCCAGAGGATCAGTTCAACACGTTTACCTGTCAGGACCAGATACTCAGTAATAACTCATTCCTCATAGTATCTGACTGTTCCTGCTAATTTTATGTGCTTACTGCCATTTGTGAATGTTTTGTAATGCAAAATGTGACATTACATTCACCAGCATGTAAATGTTAGCATTCGATTAATAATGATGGTTACAAACTGGGTTTTTGTTAGATGCAAAGATAATTTCAACCAGTAATggttaaaactaaaaaataaattctgtcattatatCATTTAATGCCTTTAGTTTGTCAATCACTCTTGTTGGTTTTCTAAATGTATAATTGTACAGAAGTCTGTCAAGCGcggccatttttttatttttattttttttttggacatgaaGTAAAATTCACTGAAAACTATCAgtaataatttaaatctttgatTCTTACTTGTATGTATGGCCTTTGTTTTTACACAAAAAATgctatacatttacatatatatgaaAAACGTGTGTATAAACACCGAAATGTGAAAATTATATCAGCATGTTTGTGATAATGAATAATGGCAGaatttattacttttgtgttatTCTTCTCTAAACTGAAGAGTAAAATTGTTACAcgtgtatatttgtgtatatttctgTACATATTTGAACGCACATTCGCTTTCGTCGAAGTGTAAATAAATACCTCGTGTAA
>TCONS_00022640
AACTGCTGCCAACTGTCCTGGACTTTTGCTCTtcctgctgtgtgtGACTTTGCCAGAATCTCCCCGATGGCTTTACTCTCGGGGTTACACAGAGAAGGCTGAGGACATCCTGCAGGATTTCGCATTGAGGAATGGGAAAGGCAGAATTGTGGTGAAGCTCCGGCGGGCCTTCAGCTCTCCAAACTCATCCAGTCCCGGGGTCTTCCAGCTGGTCACACATCCCGTACTACGCTGGAGGACTGTGGTGCTCATGTATGTGTGGTATGCCTGTAGCCTCGTTTATTACGGCCTCACTCTCAGTGCCGGTGAAGATAAAGGTAATCGTTACCTTAGTGTTGCCATGTATGGCTTGGTGGAACTGCCTGCTTATCCTCTCTGCATGTACTTCATTAACAAACAGTGgGCAGGCAGGAGAAAGTCAATGGCCAATTTTCTTGCCTTTGCAGGCATATCTTGTCTGCTCACAATGGTTGTACCTGTATCAGGGTCTTTATTAAGTGCCACATCGCTGGCTCTAGTGGGAAAACTGATGGTCAGTGCTGcttttaatattgtgtatgtgTATACATCAGAACTCTACCCAACCGTGATCAGGTACAGCCAGCACCTTTGCTGCATGTTTTGTTTGGTGCTTTTTTTACACTTACAATTTTccatagaaaaaaataagtttgaaaGGGTAATTATTTACTCGTTTGTTATCGTCATTCTTTCTTTGAACACACATTAAGCTATTTTGCATGAAATGCAAGAGCTCTCTGATGCTCCATAGACAGGAAGAGAGACACAAgagattcaaagtccagaaaagtaTAAGTGtattatgttttgttgttgttgtgtgtgagcCTATTTATaaagacacttttttttaacCCCTGTGGGATAGAcgataaagttttaaataaattgaa

Function

symbol description
slc22a15 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC22A15 (solute carrier family 22 member 15).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG:

id description
ko02000 Transporters

ZFIN:

id description
ZDB-GENE-070928-5 Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human SLC22A15 (solute carrier family 22 member 15).

Ensembl:

ensembl_id ENSDARG00000055445

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00022639 False 2416 mRNA 0.43 12 19499157 19511206
TCONS_00022640 True 914 lncRNA 0.44 5 19503856 19507340

Neighbor

gene id symbol gene type direction distance location
XLOC_011362 kif11 coding upstream 2151 19481049 ~ 19497006 (+)
XLOC_011361 NA coding upstream 191751 19307062 ~ 19307406 (+)
XLOC_011360 NA coding upstream 198985 19208475 ~ 19300172 (+)
XLOC_011358 NA coding upstream 229778 18898695 ~ 19269379 (+)
XLOC_011359 NA coding upstream 479124 19017530 ~ 19020033 (+)
XLOC_011364 CU571091.1 coding downstream 2365 19513571 ~ 19531819 (+)
XLOC_011365 NA coding downstream 95714 19606920 ~ 19614265 (+)
XLOC_011366 rgs7a coding downstream 115273 19626479 ~ 19749179 (+)
XLOC_011367 NA coding downstream 662612 20173818 ~ 20189395 (+)
XLOC_011368 gnrh3 coding downstream 692916 20204122 ~ 20207376 (+)
XLOC_011356 CU929218.1 non-coding upstream 700026 18798995 ~ 18799131 (+)
XLOC_011370 NA non-coding downstream 740255 20251461 ~ 20437298 (+)
XLOC_011376 NA non-coding downstream 1206770 20717976 ~ 20725895 (+)

Expression


Co-expression Network