G338339


Basic Information

Item Value
gene id G338339
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 713003 ~ 713261 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384830
CTGAGATCTTCTGGAACAGAACTGGTACTGATCCACTCTCTGTAGCACAGAACTGGTATTGATGGTCCACTCAACACAGACAGACCCAGTAGTCATTCTCCCACACTGGTCTAGGGTCAGCAGGGTCCAAGTTTGCTGGCAGAGGCCTCATTCAGGTGGGCTGTGCTGGGGTCAGTCATGAGTGGACCTGTTTATTGACAGAGTGACTGGATTGATCAGATCCCATTAAAACTCCCATCATTCTCAGTTCCCTGTTTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384830 True 259 lncRNA 0.50 1 713003 713261

Neighbor

gene id symbol gene type direction distance location
CI01000120_00704598_00707678 NA coding upstream 4508 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 69483 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 98773 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 231878 476999 ~ 481125 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding upstream 251960 459027 ~ 461043 (+)
CI01000120_00731213_00760512 NA coding downstream 17719 730936 ~ 760760 (+)
CI01000120_01093808_01118807 NA coding downstream 380547 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 428527 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 481734 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 519632 1232893 ~ 1241149 (+)
G338333 NA non-coding upstream 9860 702920 ~ 703143 (+)
G338331 NA non-coding upstream 18915 684282 ~ 694088 (+)
G338325 NA non-coding upstream 35148 677328 ~ 677855 (+)
G338324 NA non-coding upstream 35801 676576 ~ 677202 (+)
G338340 NA non-coding downstream 210 713471 ~ 713685 (+)
G338342 NA non-coding downstream 2508 715769 ~ 716179 (+)
G338343 NA non-coding downstream 3865 717126 ~ 717823 (+)
G338344 NA non-coding downstream 5132 718393 ~ 718706 (+)
G338345 NA non-coding downstream 5625 718886 ~ 719591 (+)
G338386 NA other downstream 50016 763277 ~ 763643 (+)
G338458 NA other downstream 151297 864558 ~ 865315 (+)
G338464 NA other downstream 165550 878811 ~ 879593 (+)
G338508 NA other downstream 293804 1007065 ~ 1009403 (+)

Expression


Co-expression Network