G338348


Basic Information

Item Value
gene id G338348
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 721712 ~ 722471 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384839
GTCTTTAGTCAGCATATTTAAATTTTATTAATAAAATGAGGTATCAATATAAATGAGGTTGTTAATATTTTTACAGATGTTACTGTATTTATTAATGAAAATAAATTTACATCCACATCCCAGCTCAAGCTACTGCTAGTGTCAATTCAAGTTACTGTCAAATGTGCATTTCCAAGAGACAAAACATGTAATATGATTAACACCCCTGCCACCTTGGTGTTACCAAATCAGGTGCTGGTGCCACCAAGTTCTACAGTGCCACTTCTCTCAAATGTTAGTCTGGAGCCCTGTAGTTTGATTGTGTGGTTGATAGTTGTGTCTGATTCATCAGTAGCTCTAGTAGGAGAAGGATTTGTATTTGAAACCATGTTGTAGCAGTGTAACTGAATGGTCTCTTTCTATTCTCCCTAGTCTCTTTTCATTTTATTGAAACATTTTGTATAGGCTGAAAAAATGAGTTCTTGACTCCTCCAGAGGTCAGGAAAATGGATAGATTTTAAAGCCCAAATTAATCAGCATCTATGCCATGCTATTTTTAAGCATATCATTTTTGATGTCATTGGGGCCATAGGCTTTTTTTGTGACTGTTTTGTGACAGTTCTTGATGGGTAATGGGAAAATGATTCTGGCTGCTCTTACAGAGGATTCTGAGCAGCTGCAGTTTTTGTATGATGTGGTCATGGTTAGAATTTAGGTCTTTTCAAAGTGCCTTTTTTAGATATCGTTATTTTGGATCAACAAGACTTGTAGTGCATTTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384839 True 760 lncRNA 0.36 1 721712 722471

Neighbor

gene id symbol gene type direction distance location
CI01000120_00704598_00707678 NA coding upstream 13217 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 78192 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 107482 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 240587 476999 ~ 481125 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding upstream 260669 459027 ~ 461043 (+)
CI01000120_00731213_00760512 NA coding downstream 8509 730936 ~ 760760 (+)
CI01000120_01093808_01118807 NA coding downstream 371337 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 419317 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 472524 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 510422 1232893 ~ 1241149 (+)
G338347 NA non-coding upstream 942 720056 ~ 720770 (+)
G338346 NA non-coding upstream 1747 719624 ~ 719965 (+)
G338345 NA non-coding upstream 2121 718886 ~ 719591 (+)
G338344 NA non-coding upstream 3006 718393 ~ 718706 (+)
G338343 NA non-coding upstream 3889 717126 ~ 717823 (+)
G338349 NA non-coding downstream 637 723108 ~ 723349 (+)
G338350 NA non-coding downstream 1133 723604 ~ 724024 (+)
G338352 NA non-coding downstream 3952 726423 ~ 726651 (+)
G338353 NA non-coding downstream 5430 727901 ~ 728340 (+)
G338354 NA non-coding downstream 6084 728555 ~ 728989 (+)
G338386 NA other downstream 40806 763277 ~ 763643 (+)
G338458 NA other downstream 142087 864558 ~ 865315 (+)
G338464 NA other downstream 156340 878811 ~ 879593 (+)
G338508 NA other downstream 284594 1007065 ~ 1009403 (+)

Expression


Co-expression Network