G338353


Basic Information

Item Value
gene id G338353
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 727901 ~ 728340 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384844
AAAACACTTCCATTGTCGAGGAAACTATGTCTAAGTTTCACCTTTCTAGCTGCTTTTAAAGCACTTATGTAGTTAGCATTCTTGGAGCTATGTTTCACACATAACATGCTACCTTTAAAAAGTTATGAAGAGTTCTTGTATGCTATTTTTTCCCTTTGATTTAAATTTTTATGACAAATATGGCTTAATGCAAGAGCAAAGATCTCATATGAGTCCTGGAAAAATTCAATGGTCAACAAATATATGAAAATGCTGTTCAAATGAGATGATTTCATTATAGTAGGTAAACATCTTCCCTTCCTAGGGCCTCACTAACACACCAAATTCAAAATAAGTGACCATAAATGGTCATCTTAGCAATGTGTCTTTGGGACTAATCTTAATGTCCTGTCTCAGAGAACAGCCAAAGGAAAACACACTCCACTCACACGGACACCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384844 True 440 lncRNA 0.36 1 727901 728340

Neighbor

gene id symbol gene type direction distance location
CI01000120_00704598_00707678 NA coding upstream 19406 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 84381 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 113671 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 246776 476999 ~ 481125 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding upstream 266858 459027 ~ 461043 (+)
CI01000120_00731213_00760512 NA coding downstream 2640 730936 ~ 760760 (+)
CI01000120_01093808_01118807 NA coding downstream 365468 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 413448 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 466655 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 504553 1232893 ~ 1241149 (+)
G338352 NA non-coding upstream 1250 726423 ~ 726651 (+)
G338350 NA non-coding upstream 3877 723604 ~ 724024 (+)
G338349 NA non-coding upstream 4552 723108 ~ 723349 (+)
G338348 NA non-coding upstream 5430 721712 ~ 722471 (+)
G338347 NA non-coding upstream 7131 720056 ~ 720770 (+)
G338354 NA non-coding downstream 215 728555 ~ 728989 (+)
G338355 NA non-coding downstream 1302 729642 ~ 730116 (+)
G338357 NA non-coding downstream 3251 731591 ~ 731791 (+)
G338358 NA non-coding downstream 4611 732951 ~ 733497 (+)
G338386 NA other downstream 34937 763277 ~ 763643 (+)
G338458 NA other downstream 136218 864558 ~ 865315 (+)
G338464 NA other downstream 150471 878811 ~ 879593 (+)
G338508 NA other downstream 278725 1007065 ~ 1009403 (+)

Expression


Co-expression Network