G338358


Basic Information

Item Value
gene id G338358
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 732951 ~ 733497 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384849
CAGACATCTAAGAATTGCCTTGGTGGCACAGACAAGGCCAGATTAAGGTCATTGAACAGGACAGAGGCACTATAATGGATGCAAGTGTTGATACAGGCAAAACACGTACATGAACTCTGTTCCAAAACTTAGTGATCTGCCATCTTTTTTACTGTCTACATAGGCAGCTTGCTTCTATATCACATCTAAAAAAAAAAACCTCTTATGTCACTGACTTAAAAAAGCCTCTTCATTGGCAGCAACTGATAGTTCATCCAGAAATGAAAATTGTCATCATTTGTCATTGTCAATATGGAGATTAAATGTCTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCCACAGAAGTAAGTCATTCAGGTTTGTAACGACATGAGGGTGAGTAAATGATAACAGATTTCATTTTGGGGAAACATACTCTACATAAAAAACACTTTTCAGGTGAAAGGCACAAAAGAGTCTGAATTTAACATGTTATTACCTAGTTCTGGCATGTAACTCTAGATTGCGTAGGCTGATAGGCATTTAACTCAATTGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384849 True 547 lncRNA 0.37 1 732951 733497

Neighbor

gene id symbol gene type direction distance location
CI01000120_00704598_00707678 NA coding upstream 24456 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 89431 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 118721 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 251826 476999 ~ 481125 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding upstream 271908 459027 ~ 461043 (+)
CI01000120_01093808_01118807 NA coding downstream 360311 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 408291 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 461498 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 499396 1232893 ~ 1241149 (+)
G338357 NA non-coding upstream 1160 731591 ~ 731791 (+)
CI01000120_00731213_00760512 NA non-coding upstream 1741 730936 ~ 760760 (+)
G338355 NA non-coding upstream 2835 729642 ~ 730116 (+)
G338354 NA non-coding upstream 3962 728555 ~ 728989 (+)
G338353 NA non-coding upstream 4611 727901 ~ 728340 (+)
G338359 NA non-coding downstream 788 734285 ~ 734602 (+)
G338360 NA non-coding downstream 1133 734630 ~ 734935 (+)
G338361 NA non-coding downstream 1719 735216 ~ 735703 (+)
G338362 NA non-coding downstream 2672 736169 ~ 736652 (+)
G338363 NA non-coding downstream 3291 736788 ~ 737377 (+)
G338386 NA other downstream 29780 763277 ~ 763643 (+)
G338458 NA other downstream 131061 864558 ~ 865315 (+)
G338464 NA other downstream 145314 878811 ~ 879593 (+)
G338508 NA other downstream 273568 1007065 ~ 1009403 (+)

Expression


Co-expression Network