G338360


Basic Information

Item Value
gene id G338360
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 734630 ~ 734935 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384851
GCTCAGTACAGTACAGCAGTTTAAGACAGTTAGGCAAAGTGACTCAAAGTACAGGTATTACAGTTACAATCCTTCTGGAATAACCAAATGTTAAGTATCTTTGTTAAGGCCACAAAGGTGAGAGCTCATGGATTTGCCTCTTGTGGGTTTGAATCTTTAATCTTCCAGTTACCAGCTCAGATCTATGCAACATATTCATTTAGCCATTCAGAATTGCTCATCAACCATTTCCACAGGTCTGCTGGTCTTCAAAAAGAAAGACAAGACTGTGAGTCCTCTTAAGAGCTCATGGTGCTTTTCTTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384851 True 306 lncRNA 0.40 1 734630 734935

Neighbor

gene id symbol gene type direction distance location
CI01000120_00704598_00707678 NA coding upstream 26135 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 91110 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 120400 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 253505 476999 ~ 481125 (+)
CI01000120_00459245_00460500 MYOD1, MYOD2, MYOD1C coding upstream 273587 459027 ~ 461043 (+)
CI01000120_01093808_01118807 NA coding downstream 358873 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 406853 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 460060 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 497958 1232893 ~ 1241149 (+)
G338359 NA non-coding upstream 28 734285 ~ 734602 (+)
G338358 NA non-coding upstream 1133 732951 ~ 733497 (+)
G338357 NA non-coding upstream 2839 731591 ~ 731791 (+)
CI01000120_00731213_00760512 NA non-coding upstream 3420 730936 ~ 760760 (+)
G338355 NA non-coding upstream 4514 729642 ~ 730116 (+)
G338361 NA non-coding downstream 281 735216 ~ 735703 (+)
G338362 NA non-coding downstream 1234 736169 ~ 736652 (+)
G338363 NA non-coding downstream 1853 736788 ~ 737377 (+)
G338365 NA non-coding downstream 3256 738191 ~ 738753 (+)
G338366 NA non-coding downstream 3828 738763 ~ 739001 (+)
G338386 NA other downstream 28342 763277 ~ 763643 (+)
G338458 NA other downstream 129623 864558 ~ 865315 (+)
G338464 NA other downstream 143876 878811 ~ 879593 (+)
G338508 NA other downstream 272130 1007065 ~ 1009403 (+)

Expression


Co-expression Network