G338393


Basic Information

Item Value
gene id G338393
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 772070 ~ 772299 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384884
ATTTATTATTATGTATTGCCCCAGTCTTTTCTATAAATAGCATGGGACAAAGCCATAGAGTTCATTAATGTTCAAAAAAGAGCTCAAAGAGAATATAAATACATAATCCTAGTTAAAAAAACAAAACAAATACAAATCTGCACACTCAAGCCAAATGAGGTGGTAGTAGCATGTTAACCTTTGGAGGGGATAGCCTATAACAGTTTATAAAAGAAGTTTGCACAACACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384884 True 230 lncRNA 0.33 1 772070 772299

Neighbor

gene id symbol gene type direction distance location
CI01000120_00731213_00760512 NA coding upstream 11310 730936 ~ 760760 (+)
CI01000120_00704598_00707678 NA coding upstream 63575 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 128550 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 157840 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 290945 476999 ~ 481125 (+)
CI01000120_01093808_01118807 NA coding downstream 321509 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 369489 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 422696 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 460594 1232893 ~ 1241149 (+)
G338392 NA non-coding upstream 92 771655 ~ 771978 (+)
G338391 NA non-coding upstream 529 771254 ~ 771541 (+)
G338390 NA non-coding upstream 2597 769125 ~ 769473 (+)
G338388 NA non-coding upstream 4738 767019 ~ 767332 (+)
G338384 NA non-coding upstream 9991 761765 ~ 762079 (+)
G338394 NA non-coding downstream 204 772503 ~ 772881 (+)
G338395 NA non-coding downstream 2008 774307 ~ 774563 (+)
G338396 NA non-coding downstream 3244 775543 ~ 775803 (+)
G338397 NA non-coding downstream 4219 776518 ~ 776748 (+)
G338399 NA non-coding downstream 4973 777272 ~ 777651 (+)
G338386 NA other upstream 8427 763277 ~ 763643 (+)
G338458 NA other downstream 92259 864558 ~ 865315 (+)
G338464 NA other downstream 106512 878811 ~ 879593 (+)
G338508 NA other downstream 234766 1007065 ~ 1009403 (+)

Expression


Co-expression Network