G338400


Basic Information

Item Value
gene id G338400
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 778212 ~ 778816 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384891
AACTGTAAGCTGTTTGTGTAAATTGTGATTAAGTACGACAGCCATGTCCGTAATAATTCATGCACAGAAGCATCAAGTGGATAGATTGGACCCTCACCTTGCAAGCAGCGCTGAAACTCCCAGCAGCTCAGTGTGTGTGTTCTTGTCCTGCTCCTCTCACTCTTACAAACTGACGCCTCTCATCCACAACTCAACGCATGGCTCTTATTACACTCATATGCAAGGAGAGGGCGAAAGAGAGAAGAGAAAGAACTAGTGAAGAGAGAGAGAGAAAACTTAGCCCAGCCCAGAAAGATAAGTGAAGCTGGCAAGACTGTCCCGAGCTTTTTAGGGTTACTCATTTCTACCTTCATTTCAGACTCTCTGCTGACAATTCCATTAATGATTTTTCCCTCCAGTCCAAAGCCTCAGAACATCTAGTGCTTCCACCTCTCAATCTATCAGTTCTCTGGAGCAGCTTTCCTCTCTGAGTTCTTCTGTGTCTAGCCTTCACTCTCCACTCCTGTACACACGTTCTCTCTCTCAGCAGCTCGAAAAGGGAAACACACCTGCCCGACTCTTATTAAAGGAGGTGATGACTCCCTATGAGGAGAACTTGCTGAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384891 True 605 lncRNA 0.46 1 778212 778816

Neighbor

gene id symbol gene type direction distance location
CI01000120_00731213_00760512 NA coding upstream 17452 730936 ~ 760760 (+)
CI01000120_00704598_00707678 NA coding upstream 69717 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 134692 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 163982 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 297087 476999 ~ 481125 (+)
CI01000120_01093808_01118807 NA coding downstream 314992 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 362972 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 416179 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 454077 1232893 ~ 1241149 (+)
G338399 NA non-coding upstream 561 777272 ~ 777651 (+)
G338397 NA non-coding upstream 1464 776518 ~ 776748 (+)
G338396 NA non-coding upstream 2409 775543 ~ 775803 (+)
G338395 NA non-coding upstream 3649 774307 ~ 774563 (+)
G338394 NA non-coding upstream 5331 772503 ~ 772881 (+)
G338401 NA non-coding downstream 1762 780578 ~ 780848 (+)
G338402 NA non-coding downstream 2211 781027 ~ 781328 (+)
G338403 NA non-coding downstream 2533 781349 ~ 781599 (+)
G338404 NA non-coding downstream 2848 781664 ~ 781960 (+)
G338405 NA non-coding downstream 4833 783649 ~ 784066 (+)
G338386 NA other upstream 14569 763277 ~ 763643 (+)
G338458 NA other downstream 85742 864558 ~ 865315 (+)
G338464 NA other downstream 99995 878811 ~ 879593 (+)
G338508 NA other downstream 228249 1007065 ~ 1009403 (+)

Expression


Co-expression Network