G338405


Basic Information

Item Value
gene id G338405
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 783649 ~ 784066 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384896
TGGTAAACGTTGGTGGACAGCCATTTTTAGGTCTCTCCAGAGATGCTCAATTGGGTTTAAGTCAGGGCTCTGGCTGGGCCATTCAAGAACAGTCACGGAGTTGTTGTGAAGCCACTCCTTCGTTATTTTAGCTGTGTGCTTAGGGTCATTGTCTTGTTGGAAGGTAAACCTTCGGCCCAGTCTGAGGTCCTGAGCACTCTGGAGAAGGTTTTCGTCCAGGATATCCCTGTACTTGGCCGCATTCATCTTTCCCTCGATTGCAACCAGTTGTCCTGTCCCTGCAGCTGAAAAACACCCCCACAGCATGATGCTGCCACCACCATGCTTCACTGTTGGGACTGTATTGGACAGGTGATGAGCAGTGCCTGGTTTTCTCCACACATACCGCTTAGAATTAAGGCCAAAAAGTTCTATCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384896 True 418 lncRNA 0.49 1 783649 784066

Neighbor

gene id symbol gene type direction distance location
CI01000120_00731213_00760512 NA coding upstream 22889 730936 ~ 760760 (+)
CI01000120_00704598_00707678 NA coding upstream 75154 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 140129 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 169419 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 302524 476999 ~ 481125 (+)
CI01000120_01093808_01118807 NA coding downstream 309742 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 357722 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 410929 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 448827 1232893 ~ 1241149 (+)
G338404 NA non-coding upstream 1689 781664 ~ 781960 (+)
G338403 NA non-coding upstream 2050 781349 ~ 781599 (+)
G338402 NA non-coding upstream 2321 781027 ~ 781328 (+)
G338401 NA non-coding upstream 2801 780578 ~ 780848 (+)
G338400 NA non-coding upstream 4833 778212 ~ 778816 (+)
G338407 NA non-coding downstream 551 784617 ~ 784972 (+)
G338408 NA non-coding downstream 1323 785389 ~ 785595 (+)
G338409 NA non-coding downstream 1636 785702 ~ 786003 (+)
G338410 NA non-coding downstream 3760 787826 ~ 788179 (+)
G338411 NA non-coding downstream 4305 788371 ~ 788603 (+)
G338386 NA other upstream 20006 763277 ~ 763643 (+)
G338458 NA other downstream 80492 864558 ~ 865315 (+)
G338464 NA other downstream 94745 878811 ~ 879593 (+)
G338508 NA other downstream 222999 1007065 ~ 1009403 (+)

Expression


Co-expression Network