G338408


Basic Information

Item Value
gene id G338408
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000120
NCBI id null
chromosome length 1315255
location 785389 ~ 785595 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU384900
GGTTTAAGATGCATAAAAGACATAACTTGGCCAAATGTAAATGCAACGCTACTCCTCCCAAGTGAATTATGTCAGCATACAGAAGTTTACAAGCCCTACAGAAATGAGCAAGCTACCACGGATGATACACATGGATAGAAAAACCTCAAAAGCCAAACACTAATTACCATATGGGATGGAGAGATATACACAGAGAGTTAGACAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU384900 True 207 lncRNA 0.40 1 785389 785595

Neighbor

gene id symbol gene type direction distance location
CI01000120_00731213_00760512 NA coding upstream 24629 730936 ~ 760760 (+)
CI01000120_00704598_00707678 NA coding upstream 76894 704287 ~ 708495 (+)
CI01000120_00639875_00643491 RASK, KRAS coding upstream 141869 639051 ~ 643520 (+)
CI01000120_00612213_00613803 NA coding upstream 171159 612213 ~ 614230 (+)
CI01000120_00477162_00480891 NA coding upstream 304264 476999 ~ 481125 (+)
CI01000120_01093808_01118807 NA coding downstream 308213 1093808 ~ 1118807 (+)
CI01000120_01141788_01144915 DYNLRB2, DYNLRB2.L coding downstream 356193 1141788 ~ 1145086 (+)
CI01000120_01194995_01221974 NA coding downstream 409400 1194995 ~ 1222463 (+)
CI01000120_01233281_01240955 SIGIRR coding downstream 447298 1232893 ~ 1241149 (+)
G338407 NA non-coding upstream 417 784617 ~ 784972 (+)
G338405 NA non-coding upstream 1323 783649 ~ 784066 (+)
G338404 NA non-coding upstream 3429 781664 ~ 781960 (+)
G338403 NA non-coding upstream 3790 781349 ~ 781599 (+)
G338402 NA non-coding upstream 4061 781027 ~ 781328 (+)
G338409 NA non-coding downstream 107 785702 ~ 786003 (+)
G338410 NA non-coding downstream 2231 787826 ~ 788179 (+)
G338411 NA non-coding downstream 2776 788371 ~ 788603 (+)
G338406 NA non-coding downstream 11141 796736 ~ 797363 (+)
G338413 NA non-coding downstream 13183 798778 ~ 799125 (+)
G338386 NA other upstream 21746 763277 ~ 763643 (+)
G338458 NA other downstream 78963 864558 ~ 865315 (+)
G338464 NA other downstream 93216 878811 ~ 879593 (+)
G338508 NA other downstream 221470 1007065 ~ 1009403 (+)

Expression


Co-expression Network